| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5351 |
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| Symbol | |
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| ID | 7975812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 55264 |
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| End bp | 55974 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795945 |
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| Product | ChaC family protein |
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| Protein accession | YP_002947219 |
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| Protein GI | 239820034 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3703] Uncharacterized protein involved in cation transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.755468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTATC CCGGCCCGCG CGAGAACGAC CGAGCTGGAT CGAAGGCAGC GGCCGAGCCC
GTGCGGGTCA CCCGCGAAGG GCTGCTCGAC GACGCCTTCA TGGCGCAGGT CTACGCGCAG
CTCCCGGCGG GCGTGCGGCT GCGCAGCGCA GAGGAGCTGG AAGCCTCCAT CGAAGGCATC
CTGTCGCGGC ACGTCGGCCA TGCGGCCGTT CATGTGTTCG GATATGGATC GCTGATGTGG
AACCCCGCGG TGGAGCACAC AGCCATGCAT CCGGCGAAAG TCCACGGTTG GCACCGCTCC
TTCTGCCTGC GCTCGGTCGT CGGGCGAGGC TCGCAGGAGC GTCCAGGGCT GATGCTCGCC
CTCGACCGGG GCGGCGCGTG CCAGGGTGTG CTGCTGCAGA TCGAACCGCG CAAGGTGCGC
GATGAGCTGC GGGTGCTCTG GCGAAGGGAG ATGCTGACCG AGGTTTACCA GGCCCGGTGG
GTGACCGCCC ATGTGGAGGG CCGGCCGGTG CGCGCGATCA CCTTTGCGGT CGACCGGTCC
CATCCCCGCT ACACGAAGGC GCTCTCCCCG CATGAGATGG CCCGGATGAT CAACACGGGA
GCGGGCAGCC TCGGCAGCTG CCGCGAGTAT TTCGATGCCA CGCTTCGAAA GCTCGAGGCG
CTCGGCATAC GCGACATGGG GATGGAGCGC CTGCGCAGCG CCGCGGGCTG A
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| Protein sequence | MRYPGPREND RAGSKAAAEP VRVTREGLLD DAFMAQVYAQ LPAGVRLRSA EELEASIEGI
LSRHVGHAAV HVFGYGSLMW NPAVEHTAMH PAKVHGWHRS FCLRSVVGRG SQERPGLMLA
LDRGGACQGV LLQIEPRKVR DELRVLWRRE MLTEVYQARW VTAHVEGRPV RAITFAVDRS
HPRYTKALSP HEMARMINTG AGSLGSCREY FDATLRKLEA LGIRDMGMER LRSAAG
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