Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5343 |
Symbol | |
ID | 7975804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012792 |
Strand | + |
Start bp | 46931 |
End bp | 47605 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795937 |
Product | hypothetical protein |
Protein accession | YP_002947211 |
Protein GI | 239820026 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCA AGAACGGCAT CGATCAGGCC GCGCTGATCA CCAAGTTCAC CGACGCCACC GCCAGGCAGG GCGAGACCAT CCGCACGACC GTGCACGAGG CCACGCTCAA GGCGCTGCAG GGCCGCGAGC TCACGCTTGC GAACATCCGG CAGGTGCTGG GCACGGTCAC CAAGGCGGCT TCGGCCGGCG CAGAAGGCAG CAAGCTGCCC GCGCCCGACG TGCAGGCGCT GCTGGCCAAG GCCTTCGCCG GCATGGACGG TGCGTTGGAG CAGGCGGTGC TGGCCAACCA GCGCGCGCTG CAGCAGCTGG TCGACCAGGG CGTGAGCTTG CGCGAGACGC AGCTCAAGAA GGCGCTCGCC GACATCGAGA AGATGGAAGA CACGCTGTTC GCCAGCGTCA GAAAGGCGGC CCCGGTGGAC GGCCCGTGGA GCGGCGTGTT CCAGGCGCTG CAGGGCAAGG GCACCGGCAC CGGCGCGCGC GCCACCGCGG CGCTCGAGCA GCTCATGCAA GACACGCACA AGAACCTGCG CGACGGCCGC GCGCTGAGCC TGCGCGCCAC GCAGGCAATG CTCGACAGCT ATGCCACGCT CGCGAGCGGC GTGCTGATCG GCATGTCCGA AGCCCTGAAG CAGGGCGGGG CGGCTTCCGG ACGCACGCCA TCGGGCAGCC ACTGA
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Protein sequence | MILKNGIDQA ALITKFTDAT ARQGETIRTT VHEATLKALQ GRELTLANIR QVLGTVTKAA SAGAEGSKLP APDVQALLAK AFAGMDGALE QAVLANQRAL QQLVDQGVSL RETQLKKALA DIEKMEDTLF ASVRKAAPVD GPWSGVFQAL QGKGTGTGAR ATAALEQLMQ DTHKNLRDGR ALSLRATQAM LDSYATLASG VLIGMSEALK QGGAASGRTP SGSH
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