| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5341 |
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| Symbol | |
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| ID | 7975802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 44941 |
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| End bp | 46125 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795935 |
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| Product | acetyl-CoA acetyltransferase |
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| Protein accession | YP_002947209 |
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| Protein GI | 239820024 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACG ATATCGTGAT CGTGGCCGCG CAACGCACGG CAGTCGGCAA GTTCGGCGGC
GCGCTGGCCG GCACGGCCGC ACCGGAACTG GGCGCGCACG TGGTGAAGGG GCTGCTCGAG
AAAGCCGGCG TGCCGGGCGA TGCGGTGTCC GAGGTGATCA TGGGCCAGGT GCTCGCGGCC
GGCGCGGGGC AAAACCCGGC GCGGCAGACG GTCATCAAGG CAGGCCTGCC CATCGGCGTG
CCGGGCCTCA CCATCAACAA GGTCTGCGGC TCGGGCCTGA AAGCCGTGAT GCTCGCGGCG
CAGGCCGTGA AGTGCGGCGA CGCCGAGATC GTCGTGGCCG GCGGCCAGGA GAACATGAGC
CTGGCGCCGC ACGTGCTGCC CAACTCGCGC AACGGCCAGC GCATGGGCGA CTGGAAGCTG
GTCGACACCA TGATCGTGGA CGGCCTGTGG GACGTCTACA ACCAGTACCA CATGGGCACC
ACGGCCGAGA ACGTGGCAAA GAAGTACGGC ATCACGCGCG AGATGCAGGA CGCGCTCGCG
CTCGCCTCGC AGCAGAAGGC CGCGGCCGCG CAGGATGCGG GGCGCTTCGA CGACGAGATC
CTGCTGTTCA GCATCGCGCA GAAGAAGGGC GACCCCATTG TCTTCGCAGC CGACGAGTTC
GTGAATCGCA AGACCAACGC CGACGCGCTC GCGGGCCTGC GCCCTGCGTT CGACAAGACG
GGCTCGGTGA CGGCCGGCAA TGCTTCGGGC CTGAACGACG GCGCGGCTGC GGTGCTGGTG
ATGTCGGCCT CGCGCGCCGC AGCGCTCGGC CTGCAGCCGC TGGCGGTGAT CCGCGCCTAT
GCGAGCGCGG GCCTGGACCC GTCGCTCATG GGCATGGGCC CGGTGCCCGC TTCGCAGCTC
GCGCTCAAGA AGGCCGGCTG GAAGGCGCAG GACCTCGACC TGATGGAGAT CAACGAAGCC
TTCGCGGCCC AGGCCTGCGC GGTCAACTGC GAGATGGACT GGGACACGAG CCGCATCAAC
GTGAACGGCG GCGCCATCGC CATCGGCCAC CCCATCGGTG CGTCGGGCTG CCGCGTGCTG
GTGACGCTGC TGCACGAGAT GCGCCGCCGC GGCGCCAACA AGGGCCTGGC CTCGCTGTGC
ATCGGCGGCG GCATGGGCGT GGCGCTCGCC GTCGAACGCG CTTGA
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| Protein sequence | MSDDIVIVAA QRTAVGKFGG ALAGTAAPEL GAHVVKGLLE KAGVPGDAVS EVIMGQVLAA
GAGQNPARQT VIKAGLPIGV PGLTINKVCG SGLKAVMLAA QAVKCGDAEI VVAGGQENMS
LAPHVLPNSR NGQRMGDWKL VDTMIVDGLW DVYNQYHMGT TAENVAKKYG ITREMQDALA
LASQQKAAAA QDAGRFDDEI LLFSIAQKKG DPIVFAADEF VNRKTNADAL AGLRPAFDKT
GSVTAGNASG LNDGAAAVLV MSASRAAALG LQPLAVIRAY ASAGLDPSLM GMGPVPASQL
ALKKAGWKAQ DLDLMEINEA FAAQACAVNC EMDWDTSRIN VNGGAIAIGH PIGASGCRVL
VTLLHEMRRR GANKGLASLC IGGGMGVALA VERA
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