| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5340 |
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| Symbol | |
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| ID | 7975801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 43559 |
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| End bp | 44893 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795934 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_002947208 |
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| Protein GI | 239820023 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCC CCGTGCAGAA GCACCGCGTG GTCATCGTGG GCGGCGGCGC CGGCGGCCTG
GAACTGGCCA CGCGCCTGGG CGATTCGCTG GGCAAGAAGG GGCGGGCGGA GATCACGCTG
ATCGACAAGC ACCGCACCCA CGTGTGGAAG CCCAAGCTGC ACGAGATCGC CTCGGGCAGC
ATGGACATGA GCGCGCACGA GGTCGACTAC CTCGCGCAGG CGCACTGGCA CCACTTTCGC
TTCCGGCTCG GCGAGCTGAC CGGCATCGAC CGCGAGCGGC GCGAAGTGCA GGTGGCGCCG
TACCTGGACG ACGAAGGCCG GCTGGTCACG CCCGAGCGCG CCTTCGGCTA CGACACGCTG
GTGGTCGCCG TCGGCAGCCT CAGCAACGAC TTCGGCACGC CCGGCGTGCG CGAGCACGCG
CTGCGGCTCG AATCGAAGGC CGATGCGCAG CGCTTTCACC AGCGCATGGT CAACGCCTGC
ATCCGCGCGC ATGCGCAGGC CACGCCGCTG CGGCCCGAGC AGCTGCACGT GGCGATCATC
GGCGCAGGCG CCACGGGCGT GGAGCTGGCG GCCGAGCTGC ACCGCACCAC GCGCGAAGTG
GTGGCCTACG GGCTGGACCG CGTGGATGCA GAGAAAGACA TCCAGGTCAG CGTGATCGAA
GCGGCCGACC GCGTGCTGCC CGCATTGCCC GCGCGCATGT CCGCCGCCAC CGAGGTGCTG
CTGCGCAAGC TGGGCGTGGA TGTGCACACC GGCGCCAAGG TGGCCGAGGT GCTGCCCGAT
GGCGTGCGCC TGGCCGACGG CCGCGTGCTG CCGGCCGAGT TGGTGGTGTG GGCCGCGGGC
GTGAAGGCGG CCGATTTCAT GAAGGACATC GCGGGCCTGG AGACCAACCG CAGCAACCAG
CTCGCGGTGC TGCCCACGCT GCAGACCACG CGCGATGCGG ACATCTTCGC GATCGGCGAC
TGCGCGGCCT GCGCCTGGCC CGAGGCCAGT GGCGGCAAGG GCGGCCTGGT GCCGCCGCGC
GCGCAGGCGG CGCACCAGCA GGCCTCGCAC GTCGCGGCGC AGATTCGCCG GCGCCTGGAC
GCAAAGGCGC TCGAGCCCTA CCGCTACCGC GACTTCGGCT CGCTGGTGTC GCTCGGCGAG
TTCAGCACCG TGGGCAACAT GATGGGCGGC CTGATCGGCG GGAGCCTGAT GGTCGAGGGG
CTGTTCGCGC GGCTCATGTA CATGTCGCTC TACAAGATGC ACGAGCTGGC GCTGCACGGC
GTCGTCAAGG TCTCGCTCGA CACGCTCGCC CGCCTCATCA CGCGGCGCAC CGAACCCCAC
GTCAAGCTGC ATTGA
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| Protein sequence | MNSPVQKHRV VIVGGGAGGL ELATRLGDSL GKKGRAEITL IDKHRTHVWK PKLHEIASGS
MDMSAHEVDY LAQAHWHHFR FRLGELTGID RERREVQVAP YLDDEGRLVT PERAFGYDTL
VVAVGSLSND FGTPGVREHA LRLESKADAQ RFHQRMVNAC IRAHAQATPL RPEQLHVAII
GAGATGVELA AELHRTTREV VAYGLDRVDA EKDIQVSVIE AADRVLPALP ARMSAATEVL
LRKLGVDVHT GAKVAEVLPD GVRLADGRVL PAELVVWAAG VKAADFMKDI AGLETNRSNQ
LAVLPTLQTT RDADIFAIGD CAACAWPEAS GGKGGLVPPR AQAAHQQASH VAAQIRRRLD
AKALEPYRYR DFGSLVSLGE FSTVGNMMGG LIGGSLMVEG LFARLMYMSL YKMHELALHG
VVKVSLDTLA RLITRRTEPH VKLH
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