| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5339 |
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| Symbol | |
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| ID | 7975800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 42129 |
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| End bp | 43526 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795933 |
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| Product | C4-dicarboxylate transporter DctA |
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| Protein accession | YP_002947207 |
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| Protein GI | 239820022 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACA CCGTGACGCC GCCGGCGTCT GAGATTTTCC AGGAGATTCC CGTGGACCAA
CCATCCGTCG CACCCAAGCC CTTCTACAGA TCGCTCTATT TCCAGGTCAT CACCGCCATC
GTGCTCGGGG TGCTGCTGGG GCACTTCTGG CCCGACACCG GCGCATCGAT GAAGCCGCTG
GGCGACGGCT TCATCAAGCT CATCAAGATG ATCATCGCGC CGATCATCTT CTGCACGGTG
GTGGTGGGCA TCGCGGGCAT GGAAGACATG AAGAAGGTCG GCAAGACCGG CGGCCTGGCG
CTCCTGTACT TCGAGATCGT GAGCTCTATC GCGCTGGTGG TGGGCCTGGT GATCATCAAC
ATCGTGCGCC CCGGCGCCGG CATGAATGTC GACGTGAGCC AGCTCGACGC CAAGAGCATC
GCGGCCTACA CCGGCCCCGG CAAGATGCAG AGCACCACCG ACTTCCTGCT CAACGTGATC
CCCAGCACGG TGGTCGACGC CTTCGCCAAG GGCGAGATCC TGCAGGTGCT GCTGATCGCG
GTGATGTTCG GCTTTGCGCT GCACAAGTTC GGCGGCCGCG GCACGCTGGT GTTCGACGTG
ATCGAGAAGG GCTCGCACGT GCTCTTCGTG ATCGTGGGCT ACATCATGAA GGTCGCGCCG
ATCGGCGCCT TCGGTGCGAT GGCCTTCACC ATCGGCAAGT ACGGCGTGAG TTCGCTGCTG
CAGCTGGGCC AGCTGATGGC CACCTTCTAC CTGACCTGCC TGCTGTTCAT CTTCGTGGTG
CTGGGGAGCA TCGCGCGCTT CCATGGCTTC AGCATCTGGA AGTTCATCAA GTACATCAAG
GAAGAACTGC TGATCGTGCT GGGCACCTCG TCGAGCGAAT CGGTGCTGCC TCGCATGATG
GCCAAGCTGG AGAACCTGGG CGCCAAGAAG TCGGTGGTCG GCCTGGTGGT GCCCACGGGC
TACTCCTTCA ACCTGGACGG CACCTCCATC TACCTGACGA TGGCGGCGGT GTTCATCGCG
CAGGCCACCA ACACCGACAT GACGCTCACG CAGCAGTTCA CGCTGCTCGC GGTGCTGCTG
CTCACCTCGA AGGGCGCAGC GGGTGTCACG GGCAGCGGCT TCATCGTGCT GGCGGCCACG
CTGTCGGCCG TGGGCCACGT GCCGGTCGCG GGCCTGGCGC TCATCCTGGG CATCGACCGC
TTCATGTCGG AAGCCCGCGC GCTGACCAAC CTGATCGGCA ACGGCGTGGC CACGGTGGTG
GTCGCCAAGT GGACCAACGA CCTGGACACC GTGCGCATGA AGCGCATCCT GGACAACGAG
ACATCGGCCG AATCCGACGC GCCCGAGGCG GTGCTGGACA AGGTCGAGAC CCACATGCCC
GTGGCCCAGC CGCGCTGA
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| Protein sequence | MNDTVTPPAS EIFQEIPVDQ PSVAPKPFYR SLYFQVITAI VLGVLLGHFW PDTGASMKPL
GDGFIKLIKM IIAPIIFCTV VVGIAGMEDM KKVGKTGGLA LLYFEIVSSI ALVVGLVIIN
IVRPGAGMNV DVSQLDAKSI AAYTGPGKMQ STTDFLLNVI PSTVVDAFAK GEILQVLLIA
VMFGFALHKF GGRGTLVFDV IEKGSHVLFV IVGYIMKVAP IGAFGAMAFT IGKYGVSSLL
QLGQLMATFY LTCLLFIFVV LGSIARFHGF SIWKFIKYIK EELLIVLGTS SSESVLPRMM
AKLENLGAKK SVVGLVVPTG YSFNLDGTSI YLTMAAVFIA QATNTDMTLT QQFTLLAVLL
LTSKGAAGVT GSGFIVLAAT LSAVGHVPVA GLALILGIDR FMSEARALTN LIGNGVATVV
VAKWTNDLDT VRMKRILDNE TSAESDAPEA VLDKVETHMP VAQPR
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