| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5334 |
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| Symbol | aceE |
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| ID | 7975795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 33261 |
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| End bp | 35933 |
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| Gene Length | 2673 bp |
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| Protein Length | 890 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795928 |
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| Product | pyruvate dehydrogenase subunit E1 |
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| Protein accession | YP_002947202 |
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| Protein GI | 239820017 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0482103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCA TGGGTGACCT TGACCCCACG GAAACCGGCG AATGGGTCGA TGCGCTCGGC
GCGGTCCAAC AGCACCGCGG CAGCGAGCGC GCGAACTTTC TGCTGAATCG CCTCGTCGAC
GAGGGCCGCC GCGACGGCGT GTACGTGCCG CGCTCGCTGA ACACGGCCTA CCGAAACACC
ATCCCGCCCG AGAAGGAAGA AAAGTCTCCC GGCAACCGCG AGATCGAGCA CCGCCTGCGC
TCGATCATCC GCTGGAACGC GATGGCGATC ATCCTGCGCG CCAACAAGGA TTCGTCCGAA
CTCGGCGGCC ACATCGCGAG CTTCCAGTCG GCGGCCACGC TCTACGACAT CGGCTTCGGC
CACTTCTGGC ATGCCGCCAC CGACACGCAT GGCGGCGACC TGCTGTTCAT CCAGGGCCAC
AGCTCGCCCG GCATCTACGC CCGCGCTTTT CTCGAAGGCC GCCTGAGCGA GCAGCAGCTG
CTCAATTACC GGCAGGAGTC CGAGGGCAAC GGCATCCCGT CGTACCCGCA CCCGTGGCTC
ATGCCCGACT TCTGGCAGTT TCCCACCGTG TCGATGGGCC TGGGCCCATT GATGGCGATC
TACCAGGCGC GCTTCCTCAA GTACCTGCAT GGCCGGGGTC TTGCCGACAC GGCGCCGCGC
AAGGTCTGGG CCTTCATGGG CGACGGCGAG ATGGACGAGC CCGAGTCGCT CGGCGCCATC
TCGCTCGCGG GCCGCGAGAG CCTGGACAAC CTCGTGTTCG TCATCAACTG CAACCTGCAG
CGCCTCGACG GCCCGGTGCG CGGCAACGGC AAGATCGTGC AGGAACTCGA GAGCGTGTTC
CGCGGGGCCG GATGGAACGT CATCAAGGTG CTCTGGGGCA GCGGTTGGGA CGCGCTGCTC
GCCAAGGACA AGAGCGGCAA GCTCTTGCAG CGCATGGAAG AGTGCGTGGA CGGCGAATAC
CAGGACTTCA AGAGCAAGAG CGGCGCCTAT GTGCGCGAGC ATTTCTTCGG CAAGTACGAC
GAGACCCGCG CGCTGGTCGC AGAGATGAGC GACGACGAGA TCTGGGGCCT CACGCGCGGG
GGCCATGACC CCGAGAAGGT GTTCGCCGCC TATGCCGCGG CCGTCAGGCA CAAGGGCCAG
CCCACGCTGA TCCTGCCCAA GACGGTGAAG GGCTACGGCA TGGGCGAATC GGGCGAGGGC
CAGATGATCG CGCACCAGGC CAAGAAGATG ACGCAGGACG CGCTACGCGG CTTTCGCAAC
CGCTTCCAGA TCCCTGTGTC CGACGAAGAG CTGCCCGACG TGCCCTTCAT CCGGCTCGCC
GAGGACAGCC CCGAGATGAA GTACCTGCGC GAGCGCCGCG CCGCGCTCGG CGGCTACCTG
CCGCAGCGCC GCCGCAAGTC GACCGCGCTC GAGATTCCGC CGCTGGCCAC CTTCGAGCGC
CTGCTCAAGG ACACCGGCGA GCGCGAGATC TCGACCACCA TGGCCTTCGT GCAGATGCTC
GGCACCTTGG TGCGCGACAA GCAGATCGGC AAGCACGTGG TGCCGATCGT GCCCGACGAG
TCGCGCACCT TCGGCATGGA AGGCATGTTC CGCCAGCTCG GCATCTGGTC ATCGCTCGGC
CAGCTGTACA AGCCGCAGGA CGCCGACCAG CTCATGTACT ACCGCGAGTC GAAGGACGGC
CAGGTGCTGC AGGAAGGCAT CAACGAGGGC GGTGCGATGT CCAGCTGGAT CGTCGCGGCC
ACCTCATACA GCACGAACAA CGTGCCGATG ATTCCTTTCT ACATCTACTA CTCGATGTTC
GGCCTGCAGC GCGTGGGCGA CCTGGCCTGG CTGGCCGGCG ACATGCGGGC GCGCGGTTTC
CTGCTGGGCG GCACTGCCGG GCGCACCACG CTCAACGGCG AGGGCCTGCA GCACGAGGAC
GGCCACAGCC ACATCCTGGC CGGCACCATT CCCAACTGCG TCTCGTACGA CCCGACCTTC
GCCTACGAGG TGGTGGCCAT CGTGCGCGAC GGCATGCGCC GCATGTACGC CGAGCAGGAG
GACGTGTATT ACTACATCAC CCTCATGAAC GAGAACTACC CGCACCCCGG CATGCCCGAG
GGCAGCGAGG CCGGCATTCT CAAGGGGCTC TACCAACTCA GCGACGGCGG CAAGACACCC
AATAAGGGCC ACCGCGTGCA ACTCGTGGGC AGCGGCACCA TCCTGCGCGA GGTGATGTTC
GCGGCCGAGC TGCTCAAGAA CGACTTCGGC ATTGCCGCCG ACGTGTGGAG CGCCACCAGC
TACAACGAGC TGCGCCGCGA CGGCATGGCC GCCGAGCGCT GGAGCCGGCT GCACCCGACC
GAGCCGGCGC GCAAGAGCCA CGTCGAGCAA TGCCTCGAAG GCCACGAGGG CCCGGTCATC
GCGGCCACCG ACTACATGCG CAACTACGCC GACCAGGTGC GCGAGTACGT GCAGGCCGCG
GGCCGGCGCT ACACCGTGCT GGGCACCGAC GGCTTCGGCC GCAGCGACTA CCGCCGCAAG
CTGCGCCGCT TCTTCGAGGT CGACCGCTGG CACGTGGCCG TGGCCGCGCT CAAGGCGCTG
GCCGACGACG GCGTGATCAA GCACACCGTG GTGGCCGAGG CCATCGAGAA GTACGGGCTC
GATGCCGAGC GCGCCGCCCC CTGGACCGTC TGA
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| Protein sequence | MSTMGDLDPT ETGEWVDALG AVQQHRGSER ANFLLNRLVD EGRRDGVYVP RSLNTAYRNT
IPPEKEEKSP GNREIEHRLR SIIRWNAMAI ILRANKDSSE LGGHIASFQS AATLYDIGFG
HFWHAATDTH GGDLLFIQGH SSPGIYARAF LEGRLSEQQL LNYRQESEGN GIPSYPHPWL
MPDFWQFPTV SMGLGPLMAI YQARFLKYLH GRGLADTAPR KVWAFMGDGE MDEPESLGAI
SLAGRESLDN LVFVINCNLQ RLDGPVRGNG KIVQELESVF RGAGWNVIKV LWGSGWDALL
AKDKSGKLLQ RMEECVDGEY QDFKSKSGAY VREHFFGKYD ETRALVAEMS DDEIWGLTRG
GHDPEKVFAA YAAAVRHKGQ PTLILPKTVK GYGMGESGEG QMIAHQAKKM TQDALRGFRN
RFQIPVSDEE LPDVPFIRLA EDSPEMKYLR ERRAALGGYL PQRRRKSTAL EIPPLATFER
LLKDTGEREI STTMAFVQML GTLVRDKQIG KHVVPIVPDE SRTFGMEGMF RQLGIWSSLG
QLYKPQDADQ LMYYRESKDG QVLQEGINEG GAMSSWIVAA TSYSTNNVPM IPFYIYYSMF
GLQRVGDLAW LAGDMRARGF LLGGTAGRTT LNGEGLQHED GHSHILAGTI PNCVSYDPTF
AYEVVAIVRD GMRRMYAEQE DVYYYITLMN ENYPHPGMPE GSEAGILKGL YQLSDGGKTP
NKGHRVQLVG SGTILREVMF AAELLKNDFG IAADVWSATS YNELRRDGMA AERWSRLHPT
EPARKSHVEQ CLEGHEGPVI AATDYMRNYA DQVREYVQAA GRRYTVLGTD GFGRSDYRRK
LRRFFEVDRW HVAVAALKAL ADDGVIKHTV VAEAIEKYGL DAERAAPWTV
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