| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5325 |
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| Symbol | |
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| ID | 7975612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 23699 |
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| End bp | 24490 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795919 |
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| Product | transcriptional regulator, GntR family |
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| Protein accession | YP_002947193 |
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| Protein GI | 239820008 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCGT CCACGCGACC TCGACCCCGG CTGGCCAAGG CGGCCCCGCC GGCGCAGGAG
GCGCCCCGCC GCCACAGCCA AGTCAGCTTG GCCGACCTCG CCTACGAGCG CTTGGAGGAA
TTGCTGGTCT GCTGCGAACT CAAGCCCGGC CGCTTCCTGG CCACGCATGA ATTGCAAGCA
ATGGTCGGCT TCGGCCGCAC GCCCGTGCTG CAGGCCGTCA ACCGCCTCGC GGCCGACACG
CTCGTGACCG TCACGCCGCG GCACGGCCTG CAGATCGCGC CGGTCGACCT CACGCGCGAC
CGCGTGCTGC TGCGCCTGCG GCGCGATATG GAACGCTTTG TGATCCGCCT GGCCACCGAG
CGATCGGGCG CGTCGCAGCG CAACCAGATG CTGCATCTCA AGCGCCAATT GCTCGAGCAC
CGCGCGGGTA TCAGCCTCGA GCAATTCAAT CTGGTCGACC GGCGTATCGA CCAGCTCTTT
CTCGCCGCCG CGGGCGAGCC GTTCGTGGAA AGCACGCTCA GGCCGCTGCA CACGATCTTC
CGGCGCATCG GCTGGATCTA TCACATGCAG ACGAAGCAGG GTGTCGACCT GCACGACACC
GTCGACGGCC ACATCGCCGT GATCGACGCC GTTGCCGATG GCAAGGCCGA TGCTGCCATT
GCTGCCTCCG ACCACCTCAT GGACTTTGTC GAGCGCATGT TCGACGTGCT CGAACGCGAG
GTCGATCCCG TCCTGCTCGA TTGCAGCTTG GGCGGGTTCG ATCAGAGCTT CCTGCCGGCA
TCGGCGCCGT AG
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| Protein sequence | MASSTRPRPR LAKAAPPAQE APRRHSQVSL ADLAYERLEE LLVCCELKPG RFLATHELQA
MVGFGRTPVL QAVNRLAADT LVTVTPRHGL QIAPVDLTRD RVLLRLRRDM ERFVIRLATE
RSGASQRNQM LHLKRQLLEH RAGISLEQFN LVDRRIDQLF LAAAGEPFVE STLRPLHTIF
RRIGWIYHMQ TKQGVDLHDT VDGHIAVIDA VADGKADAAI AASDHLMDFV ERMFDVLERE
VDPVLLDCSL GGFDQSFLPA SAP
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