| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5324 |
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| Symbol | |
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| ID | 7975611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 22362 |
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| End bp | 23636 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795918 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947192 |
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| Protein GI | 239820007 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCGG TGCTCCTGTT CGGCTGTGGC GGTGGTGGCG GAGGCGGCGG TAGCCAGGGT
GGCGGCTTCG CCGGCCTGGC GGGCCTGGCC GGCAGCAGTG GCGGCCAGGG CCCTACCGGC
GGTCAAAGCG GCGGCGGCAC CGGTGCTGCA GGTGGCACGG GCGATGCAGG CGGAGCCGGC
GGCACAGGCG GAGGCACAGG CGGAGGCACT TCGCCCACCG TCCCGGCGAC TGCCGCATTG
GTGGCCAAGC TCGGCAAGCC CGCGCGCGTG CTGCTCGGAC TCGGCGCGGG CAACACCCTC
GCGCAGATGA AGAGCCAGGA CATCCATCCG GACATCATGG ACGCCTACCT CGTGGGCGTG
GGCGCAGGTG CCTGGCCCAC CTGGAACAGC CCCGACGGGG CCTACATCAC CGTCACCGCG
CAGGCCGCCC AGGCCTACGG CGCCGTCCCG ATGTTCACGC TCTACCAGAT GGCAACGAGC
GGCGAGGGCA ACATGAGCAT CATCAACGAC ACGGCCTTCA TGAACGGCTA CTGGTCGCAG
GTGCGGCTGA TGTACCAGCG CATCGCGGCC CTCGGCGCGC CTGTCCTGGT CAACCTGGAG
CCGGACTTCT GGGGCTTCGT TGCGGCGCAA GCGCCGGGCC GTGACGCAAC GCGGCTGCCG
GCCCTGGTGA ACAGCCAGCC CGAATGCAGC GCGTTGCCGA ACACCGCCGC GGGCCTGGGC
CAATGCCTGG TGCAGATGGG CAGGCAGATC GCGCCCAAGG CGCTGCTCGG GTTCCCGCCC
GCATTCTGGA GCGGCACCGC TGCCGAGATC GGCGCGCAAA TGCGCGCGGT GGGGGCGCAC
CAGGCGGACT TCATCGTCGC CCAGACCACC GACCGCGACG CGGGCTGCCG GGAAGTTGCA
TCGCCGCCCC CGGAATGCAC GGGGCGAAGC GGGCCGTTCT ACTGGGACGA AAGCAACGTC
GCCAGCCCCA ACTTCCACGA GTCCCAGCGC CAGATCTCGG ACTACCGCGC AGCGCTGGGC
AACGCGCTGC CGATCCTGTG GTGGCAAACG CCGATGGGCG TGCCCTCCGC CACGCCGGGC
GGCACCGACC TGCACTACCG CGACAACCAT GTCGACTACA TGCTGCGCAA CGCCCAGGAG
TACGGCGACA CCTCCGCCTT CGCGATCGTC TTCAGTGCCG GAGGCAGCCT CCAGGCCTCG
ATCAGCACCG ACGACGGCCA GTTCGCCCGC CTGTCGGCTC AATATCTTGC GCGGGGCGGC
GCGGCGCTGA AGTAA
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| Protein sequence | MLSVLLFGCG GGGGGGGSQG GGFAGLAGLA GSSGGQGPTG GQSGGGTGAA GGTGDAGGAG
GTGGGTGGGT SPTVPATAAL VAKLGKPARV LLGLGAGNTL AQMKSQDIHP DIMDAYLVGV
GAGAWPTWNS PDGAYITVTA QAAQAYGAVP MFTLYQMATS GEGNMSIIND TAFMNGYWSQ
VRLMYQRIAA LGAPVLVNLE PDFWGFVAAQ APGRDATRLP ALVNSQPECS ALPNTAAGLG
QCLVQMGRQI APKALLGFPP AFWSGTAAEI GAQMRAVGAH QADFIVAQTT DRDAGCREVA
SPPPECTGRS GPFYWDESNV ASPNFHESQR QISDYRAALG NALPILWWQT PMGVPSATPG
GTDLHYRDNH VDYMLRNAQE YGDTSAFAIV FSAGGSLQAS ISTDDGQFAR LSAQYLARGG
AALK
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