Gene Vapar_5323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5323 
Symbol 
ID7975610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012792 
Strand
Start bp21787 
End bp22116 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content65% 
IMG OID644795917 
Productprotein of unknown function DUF718 
Protein accessionYP_002947191 
Protein GI239820006 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCACT GCCTTGCCCT CGACCTGAAA GACGACCCCG CGCTGATCGC CGAGTACGAG 
GCCTATCACC GCAACATCTG GCCCGAGGTG CGCGCGCATC TGCATGCGCA CGGCGTGACG
GGCATGGAGA TCTACCGGCT CGGAACGCGG ATGGTGATGC TGATGGAAAC CGACGACGCG
CGCTACGACG CCGAGGCGAT GGCGGCCGCG ACGCGCAGCG ATCCGAAGAT CCGCGCGTGG
GAAGAATTGA TGTGGAAGTT CCAGGCGCCG ACGCCCTGGA CGCCCGAAGG GGAGAAGTGG
TTGGAGATGG ATCGGATCTT CAAGCTGTAG
 
Protein sequence
MRHCLALDLK DDPALIAEYE AYHRNIWPEV RAHLHAHGVT GMEIYRLGTR MVMLMETDDA 
RYDAEAMAAA TRSDPKIRAW EELMWKFQAP TPWTPEGEKW LEMDRIFKL