| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5321 |
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| Symbol | |
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| ID | 7975608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 19652 |
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| End bp | 20932 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795915 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_002947189 |
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| Protein GI | 239820004 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.963683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG TCCGATCCAT GCGCGTGCTG GACGTGCGCT TTCCCACTTC GCAGCAGCTC
GACGGCTCCG ACGCGATGAA CCCCGACCCG GACTATTCGG CGGCCTACGT CGTGCTGGAG
ACCGACCAGC CGGGGCTCGA AGGCCACGGC CTGACCTTCA CCATCGGCCG CGGCAACGAG
ATCTGCTGCG CGGCCATCGA GGCGATGCGC CACCTGGTGG TCGGGCTCGA CCTGCAGTGG
GTGACCGAGG ACATGGGCCG CTTCTGGCGC CACGTCACCT CGGACAGCCA GCTGCGCTGG
ATCGGCCCCG ACAAGGGCGC CATCCACCTC GCGACCGGCG CGGTGGTCAA TGCCATGTGG
GACCTGTGGG CCAAGTCCGA AGGCAAGCCG GTGTGGCAGC TGGTGGCGGA CATGAGCCCC
GAGGCGCTGG TGCGCTGCAT CGACTTTCGC TACATCACCG ACTGCATCAC GCCTGAAGAG
GCGCTCGTGT TGCTGCGCGA TGCGGCCACC GGCAAGGCCG AACGCATCGC CACGCTGAAG
GCCGAGGGCT ACCCCTGCTA CACCACGTCG GCCGGCTGGC TCGGCTACTC CGACGAGAAG
CTGCGGCGGC TCGCGCAGGA GGCGGTGGAT GCGGGCTTCA ACTACCTCAA GCTCAAGGTG
GGGCGCGACC TTGCGGACGA CATCCGCCGG CTGACGGTGG CGCGCGAAGT GCTCGGTCCC
GACCGCCTCC TGATGATCGA CGCCAACCAG GTCTGGGAGG TCGGCCAGGC CATCGAATGG
GTGCGGCAGC TGGCCTTTGC CAAGCCCTGG TTCATCGAGG AGCCGACGAG CCCCGACGAC
GTCGAGGGCC ATCGCAAGAT CCGCGAGGGC ATCGCGCCGG CGGTGAAGGT GGCCACGGGC
GAGATGTGCC AGAACCGCAT CATGTTCAAG CAGTTCATCA TGCGCGGCGC GATCGACGTG
GTGCAGATCG ATGCATGCCG CCTCGGCGGC GTGAACGAGA TCCTCGCGGT GATGCTGATG
GCCGCGAAGT ACCAGCTGCC CGTGTGTCCG CACGCCGGCG GCGTGGGGCT GTGCGAGTAC
GTGCAGCACC TGTCGATGAT CGACTACCTG TGCATCTCGG GAACGCGCGA AGGGCGGGTG
ATCGAGTATG TGGATCACTT GCATGAACAC TTCGCCGAGC CCTGCGTGAT CCGCGGCGCG
GCCTACATGC CGCCCACGGC CGCGGGCTTC TCGATCACGA TGAAGCCCGA CTCGCTCGAG
CGCTACCGCT TCCGCGGATA G
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| Protein sequence | MTIVRSMRVL DVRFPTSQQL DGSDAMNPDP DYSAAYVVLE TDQPGLEGHG LTFTIGRGNE
ICCAAIEAMR HLVVGLDLQW VTEDMGRFWR HVTSDSQLRW IGPDKGAIHL ATGAVVNAMW
DLWAKSEGKP VWQLVADMSP EALVRCIDFR YITDCITPEE ALVLLRDAAT GKAERIATLK
AEGYPCYTTS AGWLGYSDEK LRRLAQEAVD AGFNYLKLKV GRDLADDIRR LTVAREVLGP
DRLLMIDANQ VWEVGQAIEW VRQLAFAKPW FIEEPTSPDD VEGHRKIREG IAPAVKVATG
EMCQNRIMFK QFIMRGAIDV VQIDACRLGG VNEILAVMLM AAKYQLPVCP HAGGVGLCEY
VQHLSMIDYL CISGTREGRV IEYVDHLHEH FAEPCVIRGA AYMPPTAAGF SITMKPDSLE
RYRFRG
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