| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5312 |
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| Symbol | |
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| ID | 7975599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | + |
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| Start bp | 8621 |
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| End bp | 9997 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795906 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947180 |
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| Protein GI | 239819995 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.104662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCAAA TCGATCTTCA CAAGCTGGCC GACGATGCCC GCTTCAACCG CTTCCACGGC
CTCGTGCTGT TCTGGTGCGC GCTGATCATC GTGTTCGACG GCTACGACCT GTCGGTCGTG
GGCATCGCGC TGCCCTCGAT CATGAAGAAG ATGGGCGTCG ACGCCACCAA CGCGGGCTTC
ATGGTCAGCT CCGCGCTTTT TGGAATGATG TTCGGCGCCA TCTTCATGGG GACCATTGCC
GACCGGATCG GACGCCGCTG GGCGATCGCC ATCTGCGTGG GCCTCTTCAG CGTGTTCACG
GCCTGCGCCG GGCTGGCGGA GGACGCCATT GCGTTCAGCG CCATGCGCTT TCTTGCCGGG
CTCGGCATCG GCGGCGTGAT GCCGAACGTC GTCGCGCAGA TGACCGAGTA CTCGCCGAAG
AAGATCCGTG CGACCCTTGT CACGCTGATG TTCAGCGGCT ATGCGGTCGG GGGGATGATC
GCGGCGATCC TCGGCAAGGG GCTCATCGAA AGCTACGGCT GGCAATCGGT GTTCTTCGCG
GCCGGCCTGC CGGTCTTGCT GATTCCCTTC ATCCTCAAAT CGGTTCCGGA ATCGATGCCC
TTCCTGCTGG CCCAGGGCCG TACCGAAGAG CTGAAGAAGA TCGCCTCACG GCTCGACCCC
AGCTACACGC CGCAGGCGAC CGACCGCTTC GCGGTGCCCG CCAAGGACCG GGCCGACAGC
GCACCGATCA AGCACCTCTT CTTCGATGGC CGCGGCTTCA GCACCGTGAT GTTCTGGATC
GCATTCTTCA TGTGCCTGTT CATGGTCTTC GCGCTGAGCT CATGGCTCAC CAAGCTCATG
GCAAGCGCGG GCTACAGCCT GGGCTCGGCC CTGACCTTCG TGCTGGTGCT GAACGCGGGT
GCGATGGTCG GCGCCATCGC GGGCGGCTGG CTCGCCGACC GGTTCCACAT CAAGTACGTG
CTCGCCGGGA TGTATGCGCT GGCCGCGGTG TCGCTCACGC TGCTGGGCTA CAAGATGCCG
ACACCGGTGC TGTTCATCCT GATCGGGCTG GCCGGCGCAT CGACGATCGG CACGCAGATC
GTGGCCAACG CCTACACCGG CCAGTACTAC CCGATGGCCG TGCGCGCCAC CGGCCTGGGC
TGGGCATTGG GCGTGGGCCG CAGCGGCGCG ATCCTGGCGC CGATCGTCAT CGGCATGCTG
GTCGGCATGA ACCTGCCGCT GCACCAGAAC TTCATTGCCA TCGCGATTCC GGCCGTCATC
GGCATGGTCG CGGTGCTGCT CATCCAGCAC GACCGCTCGG CCTCGGTGCT GAAGGCGGAG
GCCGCGCCCG CGCTGGGCAA GGTGGCGGCG GGCGTCTCCG GAACGGCCGG GAGCTGA
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| Protein sequence | MRQIDLHKLA DDARFNRFHG LVLFWCALII VFDGYDLSVV GIALPSIMKK MGVDATNAGF
MVSSALFGMM FGAIFMGTIA DRIGRRWAIA ICVGLFSVFT ACAGLAEDAI AFSAMRFLAG
LGIGGVMPNV VAQMTEYSPK KIRATLVTLM FSGYAVGGMI AAILGKGLIE SYGWQSVFFA
AGLPVLLIPF ILKSVPESMP FLLAQGRTEE LKKIASRLDP SYTPQATDRF AVPAKDRADS
APIKHLFFDG RGFSTVMFWI AFFMCLFMVF ALSSWLTKLM ASAGYSLGSA LTFVLVLNAG
AMVGAIAGGW LADRFHIKYV LAGMYALAAV SLTLLGYKMP TPVLFILIGL AGASTIGTQI
VANAYTGQYY PMAVRATGLG WALGVGRSGA ILAPIVIGML VGMNLPLHQN FIAIAIPAVI
GMVAVLLIQH DRSASVLKAE AAPALGKVAA GVSGTAGS
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