| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5311 |
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| Symbol | |
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| ID | 7975598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 7378 |
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| End bp | 8355 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795905 |
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| Product | amidohydrolase 2 |
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| Protein accession | YP_002947179 |
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| Protein GI | 239819994 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.523586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGAA AGATCGGTCT CGAAGAACAT TTCGCAATTC CACAGACGCT GCAGGATTCA
GCGGGCTTCG TGCCCGGCGT CTATTGGAAG GAGCTCAGCA GCCGCCTGCT CGACATCCAC
GACGGGCGCC TGCGCCAGAT GGATGAGCAC GGCATGGAGA TGATGATCCT CTCGCTCAAC
GCGCCCGCGG TCCAGGCGGT GGCCGATCCG GTGAAGGCGT ACGAGCTCGC GGTGCGCGCC
AACGACTTTC TCGCAGAGCA GGTGGCGAAG AGGCCCGACC GCTTCCAGGC CTTTGCCGCG
CTGCCGATGC AGGACCCCGA GAAGGCCACG CAGGAGCTCG AGCGCTGCAT GAGCGTGCTC
GGCTTTCGCG GCGCGCTGGT CAATGGCTTC TCGCAGGTGG GCACGCCCGA CAACGTCGCC
TACTACGATG CGCCGCAGTA CGCGCCCTTC TGGGCCGCCG CGGAGCGGCT CGATGCGCCC
TTCTACCTGC ATCCGCGCAA CCCCATCGCG AGCTGGGCCC AGATCTACGA AGGCCACCCC
TGGCTGCTCG GCCCCACCTG GGCCTTTGCG CAGGAGACTG CGGTTCATGC GCTGCGGCTC
ATGGCAAGCG GCCTCTTCGA TCGCCATCCG GGGCTCAAGA TCATCCTCGG CCACCTGGGC
GAGGGCCTGC CCTACAACAT GTGGCGCGTC GACCACCGCA ACGCCTGGGT CAAGGCGCCG
AAGGGCTATC CGGCCAAGCG CAAGCTCTGC GAGTACTTCC AGGAAAACTT CTATCTCACG
ACCTCCGGCA ACTTCCGCAC CCAGACGCTG ATCGATGCGA TGCTGGAGGT TGGATCGGAC
CGCATCCTGT TCTCGACCGA CTGGCCGTTC GAGAACATCG ACCATGCGTC GAACTGGTTC
AACGACACGA GCATCAGCGA GGCCGACCGC AAGAAGATCG GCCGGACGAA CGCGATGTCG
CTGTTCAAGC TCGCCTGA
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| Protein sequence | MQGKIGLEEH FAIPQTLQDS AGFVPGVYWK ELSSRLLDIH DGRLRQMDEH GMEMMILSLN
APAVQAVADP VKAYELAVRA NDFLAEQVAK RPDRFQAFAA LPMQDPEKAT QELERCMSVL
GFRGALVNGF SQVGTPDNVA YYDAPQYAPF WAAAERLDAP FYLHPRNPIA SWAQIYEGHP
WLLGPTWAFA QETAVHALRL MASGLFDRHP GLKIILGHLG EGLPYNMWRV DHRNAWVKAP
KGYPAKRKLC EYFQENFYLT TSGNFRTQTL IDAMLEVGSD RILFSTDWPF ENIDHASNWF
NDTSISEADR KKIGRTNAMS LFKLA
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