| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5309 |
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| Symbol | |
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| ID | 7975596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 5407 |
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| End bp | 6468 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795903 |
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| Product | iron-containing alcohol dehydrogenase |
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| Protein accession | YP_002947177 |
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| Protein GI | 239819992 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.203818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCGCT TCGTCTACAC CGCGAGCCCT TCGCGCATCG TCTTCGGTGC GGACAGCATC
GACCAGCTGC CGGCGGAGAT CGAGCGCCTG GGCGCGACGC GCGCCCTCGT CCTGTGCACG
CCCAACCAGC GCGAGCAGGC GCAGGCCATT GCCGACCGGC TGCCGGGCCG CATCGCAGGG
ATCTTCGACG AAGCAGCCAT GCACGTGCCG ATCGAGACCG CGCGCAAGGC ACGCGCACTG
GCTTCGGAGC TGAAGGCGGA TTGCGCGCTG GCGGTGGGCG GTGGCTCCAC CATCGGGCTC
GGCAAGGCGA TTGCGCTGGA GTCCGGCCTG CCGATCATCG CGGTTCCGAC GACCTACGCG
GGCAGCGAAG CGACGCCCAT CTACGGCATC ACGGAAGCGG GCCTGAAGAA GACCGGACGC
GACGCACGCG TGCTTCCGCG TGTCGTCATC TACGACCCCA GGCTCACGCT GTCGCTGCCC
CTGGACCTGA CGGTCACGAG CGCGATCAAT GCGATGGCGC ATGCGGCGGA AGGCCTGTAT
GCGCACGACG GCAACCCGGT GATCTCGTTG ATGGCAGAAG AAGGCATCCG CGCCTGCGCG
GCGGCGCTGC AGCCGCTGCG GGACAACCCG CGCGACCTGC CCGCACGCAG CCAGGCCCTC
TACGGCGCCT GGCTGTGCGG CACGGTGCTC GGCGCCGTGT CGATGGGCCT GCACCACAAG
CTGTGCCACA CGCTGGGCGG CACCTTCGAT CTGCCGCATG CGCAGGTGCA CACCGTGGTT
CTTCCGCATG CGCTGGCGTA CAACGCGAGC GCGGCGCCAG AGGCCATGGC GCGCATTGCA
AGAGCCCTGG GAACCGCGGA GGCGGCCATG GGGTTCTTCG AACTCGCAAG AACGCACGGC
GCTGCCGTGT CGCTGAAGGC CATCGGCATG CCGGCCGCCG GTCTTGAGCA TGCAGCCGAT
CTGGCAGTCT CCAACCAGTA TCCGAATCCG CGGCCGCTCG AGAAGGCGGC GCTGCGCGCC
CTGCTCGGCC GCGCATGGGA GGGCGCGCCG CCGCAAGCCT GA
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| Protein sequence | MERFVYTASP SRIVFGADSI DQLPAEIERL GATRALVLCT PNQREQAQAI ADRLPGRIAG
IFDEAAMHVP IETARKARAL ASELKADCAL AVGGGSTIGL GKAIALESGL PIIAVPTTYA
GSEATPIYGI TEAGLKKTGR DARVLPRVVI YDPRLTLSLP LDLTVTSAIN AMAHAAEGLY
AHDGNPVISL MAEEGIRACA AALQPLRDNP RDLPARSQAL YGAWLCGTVL GAVSMGLHHK
LCHTLGGTFD LPHAQVHTVV LPHALAYNAS AAPEAMARIA RALGTAEAAM GFFELARTHG
AAVSLKAIGM PAAGLEHAAD LAVSNQYPNP RPLEKAALRA LLGRAWEGAP PQA
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