| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5306 |
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| Symbol | |
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| ID | 7975593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 2491 |
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| End bp | 3756 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795900 |
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| Product | Acyl-CoA dehydrogenase type 2 domain protein |
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| Protein accession | YP_002947174 |
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| Protein GI | 239819989 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAG CCGCCAACCC CTTTGCTCAA CTGGACCGCG TCGACCTCCC CGCCCCAGGC
CGCAAGTCGC CCGTGAAGGA TGCGCCTTCG ATCGAAAAAA TAGTTGCATC TGCAAACAAC
ATGGTGCCGA TGCTGCGCGA GCGGGCCCAG CAAACCGAGC AGGACCGCCG CGTTTCCGAG
GCCACCACGC AGGCGTTCCA CGACGCGGGC TTCTTCAGGC TGATGCAGCC CGCACGCTAC
GGCGGCTACG AGTACGGGTT CACCGCGTTC ATCGACGTGG TCAGCGAACT GGCGCGGGGC
TGCACCTCGT CATCGTGGGG CTGCTCGCTC GGCGCCATCC ACCAGTGGCT GGTCGCGATC
TTTCCGGAAG AGGCGCAGGA CGACGTCTGG CGCAAGGACC CGCGCGCGAT CGTCTGCGGC
TCGTATGCGC CCGCGACCAT GGCCGAGAAG GTCGACGGCG GCTATCGGGT GCAAGGCAAG
TGGCTCTTTG CCTCGAACGT GGACAACTCG CAGTGGGCCT TGCTGGGCGT GCAGTTTCCG
CCTGAAGAAA AAGGCGCTCC GCCGACAGCC GGCTTTTTGC TCGCGCCGCG CTCGGACTGG
GCCATCGAGG ACAACTGGCA CGTGGCCGGC CAGGCAGGCA CCGGGTCCAA GGCGATCGTC
ATCGACAAGC CGGTGTTCGT TCCGGGGCAC CGCAAGCTGA CCTTCGCGGA GGCTTCGTCC
AACAATCCGC CGGGCGCCAA GGTCAACGCC AATCCGATCT ACCGCATCCC CTTTCTGTCG
GCGGTGCCGG TCTGCCTGGT GTCGCCGATC GTCGGCACCG CGCAAGGCGC GGTCGACGAA
CTGATCGCAC TGGCCGGCAC GCGCGTCACG CGGGGGGCCG TGGCGGGCGG CGGCAGCCGG
CTCAGCGAAT TCTTTCCCGT GCAGTCGCGC CTGGCCGAGG CATCGGCGAG CGTCGATGCG
GCGCGGCTGC TGCTCTACCG CGACACCGCG CAGGTGGAGC AGATGGCCAT GGACGGCCAT
GTCATCAGCA TCGAGCAGCG GATCCGCAAC CGGCGCGACC ATGCCTTTGC CGCGCGGCTC
TCGCGCGATG CCGTCGAGGC GGTGTTCGCG AGCGTCGGAG GCGCGGGCCT GTCGCTGAAC
CAGCCGATCC AGCGCATGTG GCGCGACACG AATGCGATCT CGCGTCACAT CAGCCTCAAC
TGGGACGCGG TCTCCTCGAT GGTGGGCCAG TACCTGCTCG GCCTGGAGCC GAAGGGCCAG
TACTGA
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| Protein sequence | MTEAANPFAQ LDRVDLPAPG RKSPVKDAPS IEKIVASANN MVPMLRERAQ QTEQDRRVSE
ATTQAFHDAG FFRLMQPARY GGYEYGFTAF IDVVSELARG CTSSSWGCSL GAIHQWLVAI
FPEEAQDDVW RKDPRAIVCG SYAPATMAEK VDGGYRVQGK WLFASNVDNS QWALLGVQFP
PEEKGAPPTA GFLLAPRSDW AIEDNWHVAG QAGTGSKAIV IDKPVFVPGH RKLTFAEASS
NNPPGAKVNA NPIYRIPFLS AVPVCLVSPI VGTAQGAVDE LIALAGTRVT RGAVAGGGSR
LSEFFPVQSR LAEASASVDA ARLLLYRDTA QVEQMAMDGH VISIEQRIRN RRDHAFAARL
SRDAVEAVFA SVGGAGLSLN QPIQRMWRDT NAISRHISLN WDAVSSMVGQ YLLGLEPKGQ
Y
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