| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5294 |
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| Symbol | |
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| ID | 7972727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5617271 |
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| End bp | 5618269 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795888 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_002947162 |
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| Protein GI | 239818252 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTCAG CTCCCCTGCC CCCCGTGGTC GACGCCGACG CAATCCTGGC GCGGGCGCGC
GCCACCTTCG ACATCGAGTC CGATGCCGTG ATCGGCCTCA AGTCGCGCGT GGGTCCGAGC
TTCGTCGAGG CCGTGCGCAA GATCCTGGAC GTGCGCGGCC GCGTGGTCGT CATGGGCATG
GGCAAGAGCG GCCACGTCGG CCGCAAGATC GCGGCGACCC TGGCCTCCAC CGGCACGCCG
GCCATGTTCG TCCACCCGGC CGAAGCGAGC CACGGCGATC TCGGCATGAT CAAGCCGGTC
GACCTGGTGC TGGCCATCTC CAACAGCGGC GAGGTCGACG AGCTCACCGT GATCCTGCCG
GTGGTCAAGC GCCAGGGCGT GCCCCTCATC GCGATGACCG GCCGCACCGA TTCCACCCTC
GCGCGCCACG CCGACATCGT GATCGACGCC GGCGTGGCCA AGGAGGCCTG CCCGCTCAAC
CTCGCCCCCA CCGCAAGCAC CACCGCCCAG ATGGCGATGG GCGATGCGCT GGCAGTGGCG
CTGCTCGACG CGCGCGGCTT CGGCTCCGAG GACTTCGCGC GCTCGCACCC CGGCGGTGCG
CTCGGCCGCA AGCTGCTCAC GCATGTGAGC GACGTGATGC GCTCGGGCGA CGAGGTGCCG
CGCGTGGCGC CCACTGCAAC GCTCAGCGAG CTGATGCGCG AGATGAGCTC CAAGGGCCTG
GGCGCCACCG CCGTGGTCGA CGCGCAAGGC CGCGCCATCG GCATCTTCAC CGACGGCGAC
CTGCGCCGCC AGGTCGAGAC CGGCGGCGAC CTGCGCGGCC TCACTGCCGC CGACGTGATG
CACCCCGGCC CGCGCACGCT GCGCGCCGAG GCGCTGGCGG TCGAGGCGGC CGAGCTGATG
GAAGAACACC GCATCACCAG CGTGCTCATC GTCGACCCCG AGGGGCTCCT GATCGGCGCG
CTCAGCATCA ACGACCTGAT GCGCGCGAAG GTCATCTGA
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| Protein sequence | MSSAPLPPVV DADAILARAR ATFDIESDAV IGLKSRVGPS FVEAVRKILD VRGRVVVMGM
GKSGHVGRKI AATLASTGTP AMFVHPAEAS HGDLGMIKPV DLVLAISNSG EVDELTVILP
VVKRQGVPLI AMTGRTDSTL ARHADIVIDA GVAKEACPLN LAPTASTTAQ MAMGDALAVA
LLDARGFGSE DFARSHPGGA LGRKLLTHVS DVMRSGDEVP RVAPTATLSE LMREMSSKGL
GATAVVDAQG RAIGIFTDGD LRRQVETGGD LRGLTAADVM HPGPRTLRAE ALAVEAAELM
EEHRITSVLI VDPEGLLIGA LSINDLMRAK VI
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