| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5287 |
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| Symbol | |
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| ID | 7972720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5611762 |
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| End bp | 5612349 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795881 |
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| Product | methionine biosynthesis protein MetW |
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| Protein accession | YP_002947155 |
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| Protein GI | 239818245 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR02081] methionine biosynthesis protein MetW |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGACA TCCAGACCCA GCGGCTCATT GCCAACCTCG TGCCCGAGGG CGCGCGCGTG
CTCGACCTCG GCTGCGGCGA CGGCGCCCTG CTCGACCTGC TGCAGCGCGA GCGCGGCTGC
ACCGGCTACG GCGTGGAAAT TGCCGACGGC AACGTGCTGC AGTGCATCCG CCGTGGCGTC
GACGTGATCC AGCTGAACCT CGACGAAGGC CTGGCGATGT TCGACGACGC CTCGTTCGAC
GTGGTGCTGC AGATCGACAC GCTGCAGCAT CTGCGAAACG CCGAGATCAT GCTGCGCGAA
ACCGCGCGCG TGGGCCGCAT CGGCATCGTG GCCTTTCCCA ACTTTGCGCA CTGGCCCAAC
CGCATCAGCA TTGCGCGCGG CCGCATGCCG GTGACGCGCC GCCTGCCCTA CCAGTGGTAC
GACACGCCCA ACATCCGGGT CGGCACCTTC AAGGACTTCG AAGTGCTGGC ACAGAAGAAC
AGCCTGCGCG TGCTCGATGC CTTCGGCGTG CAGGAAGGCC GCAGCGTGCG CTGGCTGCCC
AATGCGCGCG CCGGTACGGC CGTGTTCAAG TTCGAGCGGG AGCGCTGA
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| Protein sequence | MSDIQTQRLI ANLVPEGARV LDLGCGDGAL LDLLQRERGC TGYGVEIADG NVLQCIRRGV
DVIQLNLDEG LAMFDDASFD VVLQIDTLQH LRNAEIMLRE TARVGRIGIV AFPNFAHWPN
RISIARGRMP VTRRLPYQWY DTPNIRVGTF KDFEVLAQKN SLRVLDAFGV QEGRSVRWLP
NARAGTAVFK FERER
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