| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5283 |
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| Symbol | |
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| ID | 7972716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5608807 |
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| End bp | 5609592 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644795877 |
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| Product | protein of unknown function DUF72 |
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| Protein accession | YP_002947151 |
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| Protein GI | 239818241 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1801] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAGG CAGCATCGAC TCGGATCAAG GTGGGCATCG GCGGCTGGAC CTACGAGCCC
TGGCGCGACA ACTTCTATCC CAAGGGGCTC GCGCAGGCGA AGGAGCTGCG CTATGCGAGC
CGGCAGGTGA GCGCCATCGA GATCAACGGC ACCTACTACA GCACCTTCAA GCCCGAGACC
TTCCGCAAAT GGCACGACGA GGTGCCGGAA GACTTCGTGT TCTCGATGAA GGCCTCGCGC
TTTGCCACCA ACCGCAAGGT GCTGGCCAGC GCGGGCGATT CGATCAAGCG CTTCATCGAC
AGCGGCGTGA GCGAGCTCGG CGACAAGCTC GGCCCGATCG TGTGGCAGTT CATGCCCACG
AAGCCTTTCG ATGCGGAAGA CTTCGAGGCC TTTCTCGAGC TGCTGCCCAG GAAGGAAGGC
AGCCGCGCGC TGCGCCACGT GATGGACGTG CGGCACCCGA GCTTCATCAC GCCCGGCTAC
CAGGCGCTCG CGAAGAAGCA CAAGGTCTCG ACGGTGTTCA CCGACGCCGA CAAGTTTCCT
TCGTTCGAGG AGCCCGAGGG CGACTTCGCC TATGCGCGGC TCATGATGGC CGACGCCAAG
CTCAAGACGG GCTATGCGCC GAAGGCGCTC GACGCCTGGG CCGAACGCGC ACAGCGTTGG
GCCGAAGCAC CCAAGAAGCG CGACGTGTTC GTCTACTTCA TCAACGGCGC CAAAGAGAAA
GCACCGGCCG CGGCCGGTGC CTTGCTGGAG CGCCTGGGTT GGAAGCCGCC CGAAGAGGCG
GCCTGA
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| Protein sequence | MSKAASTRIK VGIGGWTYEP WRDNFYPKGL AQAKELRYAS RQVSAIEING TYYSTFKPET
FRKWHDEVPE DFVFSMKASR FATNRKVLAS AGDSIKRFID SGVSELGDKL GPIVWQFMPT
KPFDAEDFEA FLELLPRKEG SRALRHVMDV RHPSFITPGY QALAKKHKVS TVFTDADKFP
SFEEPEGDFA YARLMMADAK LKTGYAPKAL DAWAERAQRW AEAPKKRDVF VYFINGAKEK
APAAAGALLE RLGWKPPEEA A
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