| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5282 |
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| Symbol | |
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| ID | 7972715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5607207 |
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| End bp | 5608718 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795876 |
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| Product | peptidase M20 |
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| Protein accession | YP_002947150 |
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| Protein GI | 239818240 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCCC CCTTGCACCG CGAAATGCCC GCCGGCCTGC TCGATGCCGA GCGTGCCCTG
TCCGATGTCA GCGCCCAATG GGACGGCGAC ATCCTCAAGC AGCTCACCGA CTACATCGCC
ATTCCTGCCA AGTCGCCCGG CTTCGACAAG GACTGGTCGG CCCACGGCTA CCTGGAAACC
GTGCTGCGCA ATGCGGCGGC CTGGGTCGAG GCGCAGAAGG TCGAGGGCCT GAAGCTCGAG
ATCGTGCGCC TGGAAGGCCG CACGCCGGTG CTGTTCTTCG AAGTGGCCGC CAGCGGCACC
GATATGGGCG AGACCGTGCT GATGTACGGC CACCTCGACA AGCAGCCCGA ATTCACCGGC
TGGCGCAACG ACCTCGGCCC CTGGACGCCC AAGTACGAGA ACGGCCTGCT CTACGGCCGC
GGCGGCGCCG ACGACGGCTA TGCGGTCTAC GCCAGCATCG CCGCGCTGCA GGCGCTCAAG
AACCAGGGCG CGGCGCATCC GCGCATCGTC GGGCTGATCG AGACCTGCGA GGAAAGCGGC
TCCTACGACC TGCTGCCGTA CGTCGATGCA TTGCGCCCGC GGCTGGGCAA CGTCGAGCTG
GTGATCTGCC TGGACTCCGG CGCCGGCAAC TACGACCAGC TGTGGCTCAC CACCTCGCTG
CGCGGCATGG CCAGCGGCAC GCTCAAGGTC GAGGTGCTGA CCGAAGGCAT CCACTCGGGC
GACGCCTCGG GCCTCGTGCC CTCGAGCTTC CGGATCATGC GGCAGGTGCT CGACCGCCTC
GAGGACAGCG CCACCGGCCG GCTGCTTCCC GCGAGCTTCC ACTGCGAAGT GCCGGCCGAC
CGCCTGGCGC AGGCCAGGGC CACCGCGGCG ATCCTGGGCG ACGAGGTCTA CAAGCGCTTT
CCGTGGGCCC ACTACGACTG CGGCGGCTCG ACCATGTTCG CGCTGCCGAC CACCACCGAT
CCGGTCGAGG CGCTGCTCAA CCGCACCTGG AAGCCCACGC TGTCGGTGAC CGGCGCCGAA
GGCTTTCCGG CGCTGAAGGA CGCGGGCAAC GTGCTGCGCC CCTACACCGC CTTCAAGCTG
TCGCTGCGCC TGCCGCCGCT GGTCGATGCG GCCGAGTCGG TGCAGCAGCT GAAGGCGCTG
CTCGAGGACA ACGCGCCCTA CCAGGCGCGC GTGACCTTCG AAAGCGGCGG CGGCGCCACC
GGCTGGAATG CGCCGACCAT CACGCCGTGG TTCGAGGATG CGCTCAACAA GGCCTCGCAG
GCGCATTTCG GCGCATCCTG CGGCTACATC GGCCAGGGCG GCACGATCCC GCTGATGAAC
ATGCTGAGCG CCGGCTTTCC CAAGGCGCAG ATGATGGTCT GCGGCGTGCT GGGTCCGAAG
AGCAATGCCC ACGGCCCGAA TGAATTCCTG CACGTGCCCT ACGCCAAGAA GCTCACGGCC
GCGGTGGCCG AGGTGATTGC GGCCCTGCCG GCGGCGCACC GCGCCGCCAC CGCGGAGCCG
GCAGCCGCTT GA
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| Protein sequence | MNAPLHREMP AGLLDAERAL SDVSAQWDGD ILKQLTDYIA IPAKSPGFDK DWSAHGYLET
VLRNAAAWVE AQKVEGLKLE IVRLEGRTPV LFFEVAASGT DMGETVLMYG HLDKQPEFTG
WRNDLGPWTP KYENGLLYGR GGADDGYAVY ASIAALQALK NQGAAHPRIV GLIETCEESG
SYDLLPYVDA LRPRLGNVEL VICLDSGAGN YDQLWLTTSL RGMASGTLKV EVLTEGIHSG
DASGLVPSSF RIMRQVLDRL EDSATGRLLP ASFHCEVPAD RLAQARATAA ILGDEVYKRF
PWAHYDCGGS TMFALPTTTD PVEALLNRTW KPTLSVTGAE GFPALKDAGN VLRPYTAFKL
SLRLPPLVDA AESVQQLKAL LEDNAPYQAR VTFESGGGAT GWNAPTITPW FEDALNKASQ
AHFGASCGYI GQGGTIPLMN MLSAGFPKAQ MMVCGVLGPK SNAHGPNEFL HVPYAKKLTA
AVAEVIAALP AAHRAATAEP AAA
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