Gene Vapar_5257 details

Gene Information

• Locus tag: Vapar_5257
• ID: 7972690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 5576973
• End bp: 5577572
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644795851
• Product: putative lipoprotein
• Protein accession: YP_002947125
• Protein GI: 239818215

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.214098
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTTTC TTTTTTCTTC TTCGGCCGCT CGCCTGTTTG CCGCTGCGGT CCTGGCGGCC 
TTGCTGGCCG CCTGCGCCCA TCCGATCACG ATGATCACGG AAACCGCGCC GCCGCGGTCG 
CAGGCGCGCC TCCTTCCCAA GAAGGTGGCC TACGTGATGA CCGACGCCCA GCGCGACCAG 
CAGGTGACCA CCGCCGGCGG CAGCGGCGAC CGCGTGAGCT ACTACCCGTA CCGCGACCTC 
GAGAAGTCGA TCCGCGATGC GCTGCGCGCG GTCTACCGCG ACGTGGTCGT GCTGCGCACC 
GCCGGCGATG CCAAGGCCAA CGAGGCGGCG GGCGTGTCGC TGGTGTTCAC GCCGCAGATC 
AGGACCGATT CGAGTTCGTC CTCGTGGATC ACCTGGCCGC CCACCTCGTT CACCGCCGAG 
GTGAGCTGCG TGGTGAGCGA TGCCGCCGGC GCCGAGCTCA CGCGGGTGCG CGCGGTCGGC 
AACGGCACGG CGGAGTTCGG CGAATTCAAT GGCGACTACG GGCTCGCCGC CCGCCGCGCC 
GCCACGCGGC TGACGTCGCA GCTCAGCAGC GAGATCCGCA GGAACGAGAA GCTGCGCTGA 

 

Protein sequence

MPFLFSSSAA RLFAAAVLAA LLAACAHPIT MITETAPPRS QARLLPKKVA YVMTDAQRDQ 
QVTTAGGSGD RVSYYPYRDL EKSIRDALRA VYRDVVVLRT AGDAKANEAA GVSLVFTPQI 
RTDSSSSSWI TWPPTSFTAE VSCVVSDAAG AELTRVRAVG NGTAEFGEFN GDYGLAARRA 
ATRLTSQLSS EIRRNEKLR