| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5254 |
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| Symbol | |
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| ID | 7972687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5574532 |
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| End bp | 5575860 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795848 |
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| Product | manganese transport protein MntH |
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| Protein accession | YP_002947122 |
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| Protein GI | 239818212 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1914] Mn2+ and Fe2+ transporters of the NRAMP family |
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| TIGRFAM ID | [TIGR01197] NRAMP (natural resistance-associated macrophage protein) metal ion transporters |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0236674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCTTTC CCCTGCCCCG CACGGCCACC GCGCCCTTCT GTCCCTCCGA AGTCAAGGGC
AGCGTGGCGG TCCCGCAGGA CCTGCCGTTC GGCAAGAAGC TGCTGCGCTA CGCGGGGCCG
GGCCTGCTGG TTTCGGTGGG CTACATGGAC CCGGGCAACT GGGCGACCGA CATCGAGGCC
GGTTCGCGCT TCGGCTACGG CCTGCTCTTC GTGGTGCTGC TCGCGAGCCT CGCGGCCATG
CTGCTGCAGG CGCTGTGCGT GCGGCTCGGC CTGGTGGCGC AGAAAGACCT GGCGCGCGCC
TGCCGCGAGC ACTATTCGCC GCGCGTGAAC CGCTTCCTGT GGCTGGGCGC GGAGCTGGCC
ATCGTGGCCT GCGACCTGGC CGAGGTGCTG GGCAGCGCGC TCGCATTGCA CCTGCTGTTC
GGCGTCTCGA TCCCGGTCGG CATCGGCATC ACGGCGTTCG ACACGCTGCT CGTGCTGGGG
CTGCAGGGCG CGGGCTTCCG GCGCGTGGAG GCGATCGTGC TCGGGCTGGT GGGCACCATC
GCGGGCTGCT TCGTGGTGGA GCTTGCGATG TCGCAGCCCA ACTGGTTCGG CGTGGCAATG
GGCTTCGCGC CCAGCTTCGA GCGGCTGCAG CAGCCGGGCG CGCTGTACCT TGCGATCGGC
GTGGTGGGCG CCACCGTGAT GCCGCACAAC CTGTACCTGC ATTCGTCCAT CGTGCAGACC
CGGCTGGTGG CCGACAGCGA TGCGGCGCGG CGCGAGGCGG TGCGCTTCTG CACCTTCGAC
GCGGTGTTCT CGCTTTCGCT CGCACTGCTG GTCAACGCGG CCATCATGGT GCTGGCGGCC
AGCGCCTTCC ACAGCACCGG CCATGTGGAA GTGACCGAGA TCGACGACGC CTACCGGCTC
ATCGAGCCCA TCGTGGGCAG CGCGTTCGCG GCCACGCTGT TCGGCATTGC GCTGCTGGCC
TCGGGCCAGA GCTCGACCTT CACCGGCACC ATTGCGGGCC AGATCATCAT GGAAGGTTTT
CTCGACCTGA AGATCCCGTG CTGGCAGCGC CGCCTGATCA CGCGGGGGCT GGCGCTCGGG
CCGGCGTTCC TGGGGGTCTG GTGGTTCGGC GATGGCGGCG TGGGCAAGAT GCTGGTGCTG
AGCCAGGTGG TGCTGAGTTT TCAGCTGCCC TTCGCGATGT GGCCGCTGAT CCGCTTCACG
AGCAGCCGCG CGCTGATGGG CGGCTTTGCC AACGGCACGC TGGTCAAGCT GCTGGCCTGG
GGGCTGTTCG GCGTGATCAG CGCGGCCAAC GTGTGGCTGG TGGCGTCGGC GGTGCTCGGC
GGCCCTTGA
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| Protein sequence | MFFPLPRTAT APFCPSEVKG SVAVPQDLPF GKKLLRYAGP GLLVSVGYMD PGNWATDIEA
GSRFGYGLLF VVLLASLAAM LLQALCVRLG LVAQKDLARA CREHYSPRVN RFLWLGAELA
IVACDLAEVL GSALALHLLF GVSIPVGIGI TAFDTLLVLG LQGAGFRRVE AIVLGLVGTI
AGCFVVELAM SQPNWFGVAM GFAPSFERLQ QPGALYLAIG VVGATVMPHN LYLHSSIVQT
RLVADSDAAR REAVRFCTFD AVFSLSLALL VNAAIMVLAA SAFHSTGHVE VTEIDDAYRL
IEPIVGSAFA ATLFGIALLA SGQSSTFTGT IAGQIIMEGF LDLKIPCWQR RLITRGLALG
PAFLGVWWFG DGGVGKMLVL SQVVLSFQLP FAMWPLIRFT SSRALMGGFA NGTLVKLLAW
GLFGVISAAN VWLVASAVLG GP
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