| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5246 |
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| Symbol | |
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| ID | 7971945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5567294 |
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| End bp | 5567770 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644795840 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_002947114 |
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| Protein GI | 239818204 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00340129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCG AAAAAGACAC AGTCGTCACC CTCAAGTACA AGGTCGCCGA CGCCCAGGGC
AAGCTGATCG AAGCCAGCCC CGAGCCGATG GCCTACCTGC ATGGCGGCTA CGAAAACACG
CTGCCCAAGA TCGAGGAAGC GCTCGATGGC AAGGAAAAGG GCTTCCAGAC CACGCTGAAC
CTGGCGCCCG AAGACGCCTT CGGCCTGCGC GACGAGTCGC TGGTGCGCAG CATCCCCAAG
TCCGAATTCC CGCCGGGCGT GAAGGTGGGC GGGCAACTCG AGGGGCGCCT CGACGATGGC
ACCGAGCACC TCTTCACGGT GATGAAGATC AAGGGCCCGG TCGTGCTGCT GGACGGCAAC
CACCCCTGGG CCGGCAAGGC GCTGAAGTTC AGCCTCCAGG TGACGGACGT GCGCGCGGCG
CTGCCGGTGG AGATCGAGCA TCGGCACGTG CATGGTGCGC ATGGGCACCA TCACTGA
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| Protein sequence | MKIEKDTVVT LKYKVADAQG KLIEASPEPM AYLHGGYENT LPKIEEALDG KEKGFQTTLN
LAPEDAFGLR DESLVRSIPK SEFPPGVKVG GQLEGRLDDG TEHLFTVMKI KGPVVLLDGN
HPWAGKALKF SLQVTDVRAA LPVEIEHRHV HGAHGHHH
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