| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5231 |
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| Symbol | |
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| ID | 7969890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5552830 |
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| End bp | 5553792 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795825 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
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| Protein accession | YP_002947099 |
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| Protein GI | 239818189 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCGA ACGACAAAGG CGGCACGCCC TGCGTGGCGA TCCTGAGCGA GGTGCTGGAC
ATGGAGTACC TCGCCGTGGC CTTCCGAGAG GCTCATCCGG GCATCGACCT GCGCCTGGGC
GAAGAGCTCG GCGCGCTCGA CGAAATCGAC GCGGCCGTCT GCTGGTTTCC GCCGCACGGC
CTGCTCGCCC GGATGCCGAA GCTGCGGCTG GTGCAGTCGC TGGCCGCGGG CATCGAGCAC
ATCACGGCCG ATGCAGAGTT GCCGCGCCAC CTGCCGCTGT GCCGCATCGT CGACACCGGC
ATGGCGGCCG GCATGAAGGC CTATGTCTGC TGGGCCGTGG TGCAGCAGCA CCGCGGCATG
CGCGCGTACG TCGCGAGTTC CGCGGCCCGC CGGTGGGAGG AGCAGCCGAT CGTGTCGCCG
CGCCACCACC GCGTGGGCAT TGCGGGCCTG GGCACGCTGG GCATGGCCTG CGCCGAGGCG
CTGGCCGCCA TCGGCTACCC GGTGCGCGGC TGGAGCCGCA GCAAGAAAGA GGTGCTGCCG
GCCGGCGTCG AGGGCTTCCA CGGCGCCGCG CAGCTCGACG AATTTCTCTC GGGCTGCGAC
ACGCTGGTGT GCCTGCTGCC GCTCACCGCC GAGACGCACG GCTTTCTCGA TGCCGCGCTG
TTCGCCAGGC TGCCGCGCGG CGCGCACCTG ATCAACGTCG GCCGCGGCGA CCACCTGGTC
GAGGCCGACC TGCAGCCGGC GCTCGATGCG GGCCAGCTCT CGGCGGCCAC GCTCGACGCC
TTCTCGCAGG AGCCGCTGCC GCAGGACCAT CCGTTCTGGG GCGACCCGCG CATCCTCGTC
ACGCCGCACA TCGCCACGCG CACCGACAGC CTCGTGATCG CGCGCCAGAC GCTCGACAAC
CTCGCGTCGC TGCGGCAAGG CCGGCGCCCC GCGAACCAGG TCGACCTGGC GCGCGGCTAT
TGA
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| Protein sequence | MAPNDKGGTP CVAILSEVLD MEYLAVAFRE AHPGIDLRLG EELGALDEID AAVCWFPPHG
LLARMPKLRL VQSLAAGIEH ITADAELPRH LPLCRIVDTG MAAGMKAYVC WAVVQQHRGM
RAYVASSAAR RWEEQPIVSP RHHRVGIAGL GTLGMACAEA LAAIGYPVRG WSRSKKEVLP
AGVEGFHGAA QLDEFLSGCD TLVCLLPLTA ETHGFLDAAL FARLPRGAHL INVGRGDHLV
EADLQPALDA GQLSAATLDA FSQEPLPQDH PFWGDPRILV TPHIATRTDS LVIARQTLDN
LASLRQGRRP ANQVDLARGY
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