| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5225 |
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| Symbol | |
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| ID | 7969884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5546286 |
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| End bp | 5547569 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795819 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_002947093 |
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| Protein GI | 239818183 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.502422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCC TCGCCCCTTC GACCCAGGCC CTCGTCGAGC GCCGCGCGCG CGTGCTCGGC
CCAGCCTACC GCCTGTTCTA CGAGACGCCG CTGCACCCGG TGCGCGGCGA GGGCGTGTGG
CTGTACGACG CCGAGGGCCG GCCCCACCTC GATGCCTACA ACAACGTCGC CTCGGTCGGC
CACTGCCACC CGCACGTGGT CGAGGCCATC GCGCGCCAGG CCGGCGTGCT CAACACCCAC
ACGCGCTACC TGCACGAAGG CGTGCTCGAC TACGCCGAGC GGCTGCTCGC CACCCTGCCG
GCCGAACTCG CGCACGCGAT GTTCACCTGC ACCGGCAGCG AGGCCAACGA CTTGGCGATG
CGCATCGCAC GCTCGCACAC CAAGGCCGAG GGGCTGATCG TCACGCGCTT CGCGTACCAC
GGCGTCACCG CGTCGATCGC CGAGGCCTCG CCCTCGCTCG GCAAGTTCGT GCAGCTCGGC
GATGCGGTGC GCACCGTGCC CGCGCCTGAC AGCTACCGCA CTGCGCCCGG CGAACTGGGT
CGCGCGTTCG CGGATGGCGT GCGCGAGGCC ATCGCGGACC TCAAGGCGCA CGGCATGCGC
CCGGCCGCGC TGATGGTCGA TACCGTGTTC TCGAGCGACG GCATCTTCAC CGACCCGCCC
GGCTTCATGG CCGAGGCGGT GGACACGGTG CGCGAGGCCG GCGGCCTCTT CATCGCCGAC
GAGGTGCAGC CCGGCCTGGG GCGCACCGGC GACGCGTTCT GGGGCTTCCA GCGGCACGGC
GTGGTGCCCG ACATCGTCAC CATGGGCAAG CCGCTCGGCG CCGGCCATCC GCTGGCAGGC
CTCGCGGTGC GGCCCGAGGT GCTGGCCGCC TTCGGACGCG AGTGCCGCTA CTTCAACACC
TTCGGCGGCA ATCCGGTGTC GATGGCCGCG GGCATGGCGG TGCTCGACGT GGTCGAGCGC
GAAGGCCTGA TGGCCAACGC GCAGCGCGTC GGCAGTTACC TGCGCGCGCA GATCGCGAAG
CTCGCCGAGC GCCATGCGCT GATCGGCGAC GTGCGCGGCG CGGGCCTGTT CGTGGGCGTG
GAGCTCGTCA CCGACCGCCG CACCCGCACG CCCGCCACCG CGGAAACCGC GCGCATCGTC
AATGGCCTGC GCGAGCGGCA GGTGCTGCTG AGCGCCACCG GCGAGCACGC CAACACGCTC
AAGATCCGCC CGCCGCTGGT GTTCTCCGAA GCCCATGCCG ACCTGCTGGC CGAGACGCTC
GGCCAGGTGC TGGCCGGCCT CTGA
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| Protein sequence | MTSLAPSTQA LVERRARVLG PAYRLFYETP LHPVRGEGVW LYDAEGRPHL DAYNNVASVG
HCHPHVVEAI ARQAGVLNTH TRYLHEGVLD YAERLLATLP AELAHAMFTC TGSEANDLAM
RIARSHTKAE GLIVTRFAYH GVTASIAEAS PSLGKFVQLG DAVRTVPAPD SYRTAPGELG
RAFADGVREA IADLKAHGMR PAALMVDTVF SSDGIFTDPP GFMAEAVDTV REAGGLFIAD
EVQPGLGRTG DAFWGFQRHG VVPDIVTMGK PLGAGHPLAG LAVRPEVLAA FGRECRYFNT
FGGNPVSMAA GMAVLDVVER EGLMANAQRV GSYLRAQIAK LAERHALIGD VRGAGLFVGV
ELVTDRRTRT PATAETARIV NGLRERQVLL SATGEHANTL KIRPPLVFSE AHADLLAETL
GQVLAGL
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