| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5224 |
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| Symbol | |
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| ID | 7969883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5544996 |
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| End bp | 5546201 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795818 |
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| Product | amidohydrolase |
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| Protein accession | YP_002947092 |
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| Protein GI | 239818182 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.220885 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCG TCGATTCCTT TGCCGCCCAC GCCTCCCGCT TCGTCGATAT CCGGCGCGAC
ATCCATGCCC ATCCCGAGCT CGGCTTCGAG GAGCACCGCA CCTCCGAAAA GGTGGCGGGC
CTGCTCGCCG AATGGGGCAT CGAGGTGCAC CGCGGCATTG CCGGCACCGG CCTGGTCGGC
GTGCTGCGCA AGGGCAGCGG CACGCGCACC ATCGGCCTGC GCGCCGACAT GGACGCGCTG
CCGCTGCACG AGGCCAACGA GTTCGCCCAC AAGTCCACCC ACGCCGGCCG CATGCATGCC
TGCGGCCACG ACGGCCACAC CACCATGCTG CTGGCCGCCG CCTGGCACCT GTCGCAGCAG
GGGCCGGACG ACTTCGACGG CACCGTGCAT TTCATCTTCC AGCCCGCCGA GGAGATGGGC
AAGGCCGGCG CCAGGAAGAT GATCCAGGAC GGCCTGTTCG AGCGCTTTCC GTGCGACGCG
GTCTTTGCGC TGCACAACTT CCCGGTCGGC GACGTGGGCC GCTTCGCGCT CAACGAAGGC
GCGCTGATGG CCTCGAGCAA CACCTACAAG ATCACCGTGC GCGGGCGCGG CACGCACGCC
TCGATGCCGC ACACCGGCAT CGACCCCGTG GCCGCGGTGG TCACGCTCGC GCAGCAGCTG
CAGACCATCG TGCCGCGCAC CATTCCGAGC ACCGAGCGCG CCCTGCTCGC GGTCACGCAG
CTGCAGGGCT CCGATGCGCC CAACGTGATT CCCGACGTGG CCACGGTGGG CGGCACCATC
CGCACCTTTT CGATCGAGGC CATCGACAAG ATCGAGGCGC GGCTGCGCGA AGTGGCCGCC
GGTGTGGCCG CGGCGCACGG CTGCACGGCC GAGGTCTTCT TCAACCGCTC CTCGCCGCCG
GTGGTCAATC ACCCGGCCGA GGCGCGCTTT GCCGCCGGCG TGATGCGCGA GGTGGTGGGC
GACGGCATGG TCACCGACAA TTTTCCCGCC GTGATGGGCG CCGAGGACTT CGCGCACATG
CTGCTCGCGC GGCCCGGCTG CTATGCCTTC CTCGGCAATG GCGACGGCGA CCACCGGCTC
GACGGCCATG GGCCCGGCCC TTGCATCATC CACAACACCT CGTTCGACTT CAACGACGAG
ATCATTCCGA TCGGCGCCAG CTACTTCGTG AAGCTGGTGC AGCGCTGGCT GCCCTCTGGC
GGCTGA
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| Protein sequence | MNIVDSFAAH ASRFVDIRRD IHAHPELGFE EHRTSEKVAG LLAEWGIEVH RGIAGTGLVG
VLRKGSGTRT IGLRADMDAL PLHEANEFAH KSTHAGRMHA CGHDGHTTML LAAAWHLSQQ
GPDDFDGTVH FIFQPAEEMG KAGARKMIQD GLFERFPCDA VFALHNFPVG DVGRFALNEG
ALMASSNTYK ITVRGRGTHA SMPHTGIDPV AAVVTLAQQL QTIVPRTIPS TERALLAVTQ
LQGSDAPNVI PDVATVGGTI RTFSIEAIDK IEARLREVAA GVAAAHGCTA EVFFNRSSPP
VVNHPAEARF AAGVMREVVG DGMVTDNFPA VMGAEDFAHM LLARPGCYAF LGNGDGDHRL
DGHGPGPCII HNTSFDFNDE IIPIGASYFV KLVQRWLPSG G
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