Gene Vapar_5208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5208 
Symbol 
ID7969867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5530888 
End bp5531775 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID644795802 
Productpeptidase C26 
Protein accessionYP_002947076 
Protein GI239818166 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAAC CCGTTTCCGC CCGGCTGAAG ATCGGCTTGT CCGCCTGCTT TTCCCACGCC 
GATCCGGCGC GTTCGCTCTT CACCAACAAG ACGCTGCAGT ACGTCGAGCA GTCCATTGCG
CACTGGCTCA TGTCGGCCGG TGCCATGGTG GTGATGGTGC CCTGCCCCAC GGGCGAAACC
GCGCGCGGCG ACACCAAGCT CTCGCACTAC GCCGAATGGC TCGACGGCGT GGTGATGCAC
GGCGGCGCCG ACGTCTGGCC CGGCAGCTAC GGCGAGGTGC CGCTCAAGGA CGCCTGGGTG
GGCGACCGCA TCCGCGACCT GTACGACCTG GCGCTGGTCG AGGCCTTCGA GCAGGCCGGC
AAGCCCATCT TCGGCGTCTG CCGCGGGCTG CAGCTGATCA ATGTGGCCTT CGGCGGCACG
CTCTACCAGG ACATCGAGGC GCAGCACGAG CATCCCGAAG CCGTGCGGCA CCGCGACCCG
GTGACCTACG ACCAGAACTT CCACCAGATC GAGATCGTGG AGGGCACGCG CCTGGCCAAG
CTCTACCCCG AGGTCCAGAC CGCCAAGGTC AACAGCATCC ACCACCAGGG CGTGAAAGAC
CTCGCGCCGG GTTTCGAGAT CGAGGCCTGG AGCCTGCCCG ACCGCGTGCC CGAGGCCATC
CGCCGCCGCG CCGACAGGGG CCGCAGCTAC ATCGCCGCCA CGCAGTGGCA CCCCGAATTC
CACAAGTACG GCAGCACCGA GACGGTCGAC GACACGCCGA TCCTGCACGA CTTTCTCTGG
GCCTGCGCCA CCGCGAAGGT GGCGCCGCGC ACCCTGCCGG ATGCCGGGCA CGGCCGCATC
CGCGACCGCG CGGCGCGGGT GCTGCGCCAG GCGCTGCTGC GGCGCTGA
 
Protein sequence
MPQPVSARLK IGLSACFSHA DPARSLFTNK TLQYVEQSIA HWLMSAGAMV VMVPCPTGET 
ARGDTKLSHY AEWLDGVVMH GGADVWPGSY GEVPLKDAWV GDRIRDLYDL ALVEAFEQAG
KPIFGVCRGL QLINVAFGGT LYQDIEAQHE HPEAVRHRDP VTYDQNFHQI EIVEGTRLAK
LYPEVQTAKV NSIHHQGVKD LAPGFEIEAW SLPDRVPEAI RRRADRGRSY IAATQWHPEF
HKYGSTETVD DTPILHDFLW ACATAKVAPR TLPDAGHGRI RDRAARVLRQ ALLRR