Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5208 |
Symbol | |
ID | 7969867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5530888 |
End bp | 5531775 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644795802 |
Product | peptidase C26 |
Protein accession | YP_002947076 |
Protein GI | 239818166 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCAAC CCGTTTCCGC CCGGCTGAAG ATCGGCTTGT CCGCCTGCTT TTCCCACGCC GATCCGGCGC GTTCGCTCTT CACCAACAAG ACGCTGCAGT ACGTCGAGCA GTCCATTGCG CACTGGCTCA TGTCGGCCGG TGCCATGGTG GTGATGGTGC CCTGCCCCAC GGGCGAAACC GCGCGCGGCG ACACCAAGCT CTCGCACTAC GCCGAATGGC TCGACGGCGT GGTGATGCAC GGCGGCGCCG ACGTCTGGCC CGGCAGCTAC GGCGAGGTGC CGCTCAAGGA CGCCTGGGTG GGCGACCGCA TCCGCGACCT GTACGACCTG GCGCTGGTCG AGGCCTTCGA GCAGGCCGGC AAGCCCATCT TCGGCGTCTG CCGCGGGCTG CAGCTGATCA ATGTGGCCTT CGGCGGCACG CTCTACCAGG ACATCGAGGC GCAGCACGAG CATCCCGAAG CCGTGCGGCA CCGCGACCCG GTGACCTACG ACCAGAACTT CCACCAGATC GAGATCGTGG AGGGCACGCG CCTGGCCAAG CTCTACCCCG AGGTCCAGAC CGCCAAGGTC AACAGCATCC ACCACCAGGG CGTGAAAGAC CTCGCGCCGG GTTTCGAGAT CGAGGCCTGG AGCCTGCCCG ACCGCGTGCC CGAGGCCATC CGCCGCCGCG CCGACAGGGG CCGCAGCTAC ATCGCCGCCA CGCAGTGGCA CCCCGAATTC CACAAGTACG GCAGCACCGA GACGGTCGAC GACACGCCGA TCCTGCACGA CTTTCTCTGG GCCTGCGCCA CCGCGAAGGT GGCGCCGCGC ACCCTGCCGG ATGCCGGGCA CGGCCGCATC CGCGACCGCG CGGCGCGGGT GCTGCGCCAG GCGCTGCTGC GGCGCTGA
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Protein sequence | MPQPVSARLK IGLSACFSHA DPARSLFTNK TLQYVEQSIA HWLMSAGAMV VMVPCPTGET ARGDTKLSHY AEWLDGVVMH GGADVWPGSY GEVPLKDAWV GDRIRDLYDL ALVEAFEQAG KPIFGVCRGL QLINVAFGGT LYQDIEAQHE HPEAVRHRDP VTYDQNFHQI EIVEGTRLAK LYPEVQTAKV NSIHHQGVKD LAPGFEIEAW SLPDRVPEAI RRRADRGRSY IAATQWHPEF HKYGSTETVD DTPILHDFLW ACATAKVAPR TLPDAGHGRI RDRAARVLRQ ALLRR
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