Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5205 |
Symbol | |
ID | 7969864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 5528765 |
End bp | 5529730 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644795799 |
Product | hypothetical protein |
Protein accession | YP_002947073 |
Protein GI | 239818163 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.419234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACGTC GTCATCTTCT TTCTGCCCTG GCCGCTGTTT CTGTCGCGCC TGGAATATCC TTTGCTCAGC AAGGCAAGCC GATCCGCATG ATCGTGCCCT TCCCGCCCGG CGGCGCCACC GACATCACGG CGCGCGTGCT GTCGGAGCCG CTGGCCAAGA TCCTCCAGCA GCCCGTGGTC ATCGACAACC GCGCCGGCGC CGGCGGCTCC ATCGGCATGG CCGAGGTGGC CCGCTCCGCG CCGGACGGCC TCGCCTTTGG CGTGGCCACG CTCTCCACGC ACGGCGTGAA CCCGGCCGTC TACCAGAAGC TGCCTTATGA CCCGCTCAAG GGCTTCGTCG CCGTGACCGA GCTGGTGAAG GCGCCCGGCG TGGTCGTCAT CAACCCGCGG GTGTTGCCGG TGCAGAGCTT CGCGGAACTC GTGAAGTACC TGAAGGCCAA TCCGGGCAAG GTGTCGTACG CCTCGCCGGG CAACGGCACC ATCGGCCACA TGTGGGGCGA ACTCTTCAAG AGCAGCACCG GAACCTCGAT GGTGCACATC CCCTACCGCG GTGCGGGCCC GGCCATCAAC GACGTGCTCG CGGGCGAGGT GCCGGTGTAT TTCGACCAGG TGGCCTCGTC GCTGCCGCAC GTGAAGGCGG GCAAGCTGAA GGCGCTGGCC GTGTCCTGGA GCAGCCGGCT CGACGTGCTG CCCGAAGTGC CGACCTACCG CGCGCTCGGC TACCCGGCCA ACAACGATCC GTCGTGGTTC GGCCTCGTGG CGCCCGCCGG CACGCCGGCC GACATCGCGC TGCGCATGCA GCAGGCGGTG GCCACGGCGC TGAAGGACGC CACGGTGCGC GAGCGCCTGG CGCTGCAGGG GCTGTACGCC TCGGGCACCA CGCCGGCCGA ATTTGCCAAG CAGATCGACA GCGAGATCGA GAAGATGAAA AAAGTCGCCG CCTTCGCGCG CATCCGATTG GACTGA
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Protein sequence | MQRRHLLSAL AAVSVAPGIS FAQQGKPIRM IVPFPPGGAT DITARVLSEP LAKILQQPVV IDNRAGAGGS IGMAEVARSA PDGLAFGVAT LSTHGVNPAV YQKLPYDPLK GFVAVTELVK APGVVVINPR VLPVQSFAEL VKYLKANPGK VSYASPGNGT IGHMWGELFK SSTGTSMVHI PYRGAGPAIN DVLAGEVPVY FDQVASSLPH VKAGKLKALA VSWSSRLDVL PEVPTYRALG YPANNDPSWF GLVAPAGTPA DIALRMQQAV ATALKDATVR ERLALQGLYA SGTTPAEFAK QIDSEIEKMK KVAAFARIRL D
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