| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5203 |
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| Symbol | |
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| ID | 7969862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5526705 |
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| End bp | 5527703 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795797 |
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| Product | hypothetical protein |
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| Protein accession | YP_002947071 |
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| Protein GI | 239818161 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGCGG GGCGCAGGCA TTTCGCCGCC GGGCTGGCGG CTGGTGCGGC GGCCCTGCTG
CTTGCCGGCA CGGCCGGCTT GGCGCAGGCC GCGGCCTGGC CCGACAAGCC CGTGAAGCTG
GTGGTGCCGT TCCCGCCCGG GCAGGCCACC GACATCTTCG CGCGCGCACT CGCCGAGCAG
CTCGGCAAGC GGCTGGGCCA GCCGGTGATC GTCGACAACA AGGCCGGTGC CGGCAGCAAC
ATCGGCACCG AGTTCGTGGT GCGCGCGCCG GCCGACGGCT ACACGCTGGT GGTGGCCGGC
AGCGCGATGG CGGTGAACCA GACGCTCTAC GCCAAGCCGG GCTTCGATCC GCGCAAGGAC
CTGGTGGGCA TCTCGCTCAT CGCCACGGTG CCGCTGGTGT TCCTGGCCAC GCCCGAGAGC
GGCATCCGCA GCATGGCCGA CCTGGCGGCG CACGCCAAGG CCGAACCGGG CCGGCTGAGC
TATGCGAGCG CCGGCATCGG CGGCACGCAG CACCTGTCGG GCGAGATGTT CAAGTCGGCC
GCGCGCGTCT TCATCACCCA CATTCCGTAC CGCGGCAGCG GGCCGGCGCA GTCGGACTTC
CTGGGCAACC AGATTCCGCT GATGGTCGAC TCGGTGACGG CCGCGCTGCC GCACATCAAG
TCGGGCAGGG CGGTGGCGCT GGCGGTGACC TCGGCCAAGC GCTCCTCGCA GCTGCCTGAC
GTGCCCACCG TGCGCGAAAG CGGCGTGGCC GGCACCAGGG ACTTCGAGGC CGTGGGCTGG
CTCGGCCTGA TGGCGCCGCG CGGCACGCCG CCCGAGATCA CGGCGCGGCT GAACCAGGAA
GTGACCGACA TCCTCAAGAG CGAGCAGATG GCGCGCTTCA TCCGCGACCG CGGCTCCGAG
CCCGCGCCCA CCACGGGCGC CGAGTTCGAC CGCTTCGTGG CGAACGAGAT CCAGCGCTGG
GGCGGCGCGG TGAAGGCCTC GGGCGCCAAG CCCGAGTAG
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| Protein sequence | MRAGRRHFAA GLAAGAAALL LAGTAGLAQA AAWPDKPVKL VVPFPPGQAT DIFARALAEQ
LGKRLGQPVI VDNKAGAGSN IGTEFVVRAP ADGYTLVVAG SAMAVNQTLY AKPGFDPRKD
LVGISLIATV PLVFLATPES GIRSMADLAA HAKAEPGRLS YASAGIGGTQ HLSGEMFKSA
ARVFITHIPY RGSGPAQSDF LGNQIPLMVD SVTAALPHIK SGRAVALAVT SAKRSSQLPD
VPTVRESGVA GTRDFEAVGW LGLMAPRGTP PEITARLNQE VTDILKSEQM ARFIRDRGSE
PAPTTGAEFD RFVANEIQRW GGAVKASGAK PE
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