Gene Vapar_5201 details

Gene Information

• Locus tag: Vapar_5201
• ID: 7969860
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 5522951
• End bp: 5523583
• Gene Length: 633 bp
• Protein Length: 210 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 644795795
• Product: Histone-lysine N-methyltransferase
• Protein accession: YP_002947069
• Protein GI: 239818159
• COG category: [R] General function prediction only
• COG ID: [COG2940] Proteins containing SET domain

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0501783
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTTCCA AATCCCCACA ATTCGCCGGC CGCCGCATCC AGATGCGGCG CTCGGATGTC 
CACGGCAACG GCGTGTTCGC CGTGGACGAC CTGGCCGAGG GCGAAACGCT GATCGAATAC 
AAGGGCGAAG TCATCAGCTG GAAAGAGGCG CTGCGCCGCC ACCCGCACGA CCCGGCCCAG 
CCGAACCACA CCTTCTACTT CCACATCGAC GACGGGCGCG TGATCGACGG CAACGTCAAG 
GGCAACGATG CGCGCTGGAT CAACCATTCG TGCGAGCCGA ACTGCGAGGC CGACGAGATC 
GATGGGCGCG TTTATATCAA GGCGCTGCGC AACATCGCTG CAGGAGAAGA GCTCAACTAC 
GACTACGGCC TGATCATCGA CGAACCCTAC ACGCCGAAGC TGCTGTCCGA GTTTCCCTGC 
TGGTGCGGTT CCGAGAATTG CCGCGGCACG CTGCTGACGC CCAAGGACGA AGACGAAGAA 
AAGAAAAAGA AGAAAAAGGC CAGGAAGAAG GCCGAAAAGA AAAAGGCCGA GAAAAAGGAA 
GCCAGGAAGG CGGACAAGAA AGCCGAAAAA AAGGCCGAAA AGAAGCCGGA AAAAAAGAAG 
TCCAAGAAGG CCGACGGAGC CGCCAAGGGC TGA 

 

Protein sequence

MPSKSPQFAG RRIQMRRSDV HGNGVFAVDD LAEGETLIEY KGEVISWKEA LRRHPHDPAQ 
PNHTFYFHID DGRVIDGNVK GNDARWINHS CEPNCEADEI DGRVYIKALR NIAAGEELNY 
DYGLIIDEPY TPKLLSEFPC WCGSENCRGT LLTPKDEDEE KKKKKKARKK AEKKKAEKKE 
ARKADKKAEK KAEKKPEKKK SKKADGAAKG