| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5198 |
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| Symbol | |
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| ID | 7969857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5520452 |
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| End bp | 5521897 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795792 |
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| Product | histidine kinase |
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| Protein accession | YP_002947066 |
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| Protein GI | 239818156 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.201124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTCT TCCAGCGCGC GCAGCGCTCC CTGTTCGGCG AGATCCTCGA CTGGATGCTC
ACGCCGCTCC TGCTGCTGGT GCCGGTGAGC ATCGGCGTGA CCTGGCTGGT GGCGCAGGGC
ATTGCCAATG CACCCTTCGA CCGCGCGCTC GAATACAACG TGCAGACGCT GGCACGGCTG
GTCACGGTGC AGCAGGGGCA GACGCAGTTC GTGCTGCCGC AGCCGGCGCG CGAGATCCTG
CGGGCCGACG GCGCCGACCG CGTCTACTAC CAGGTGCTCG ACAGCCACGG CGCGCTGCTC
AGCGGCGAGC CCGACGTACC GCATCCCAAC TCCGATGAGC CCCCGGTTCC CGGCGTGGTC
ACGCTCCGCA ACGGCGAGAT GCGGGGCAAG TCGGTGCGCG TGGCCTCGCT CTGGCTCGCG
GGCCCCGACA GCGACGCGGA GCCGGCGCTG CTGCAGGTGG CCGAGACGCG CGAGAAGCAG
TCGGTGCTGG CCACCGAGAT CATCAAGGGC GTGCTGCTGC CGCAGTTCGC GATCCTGCCG
CTGGCCGTGC TGCTGATCTG GCTGGCGCTG GTGCGCGGCA TCAAGCCGCT GTCGGTGGTG
GAGGCGCGCA TCCGCGAGCG CCGCCCGGGC GACCTGAGCC CGCTGGACGA ATCGTCGGTT
CCGCTGGAGG TGGTGCCGCT GGTGTCGTCG GTGAACGAGC TGCTCGACAA GCTCAACGAT
TCGATCCACA CGCAAAAGCG CTTTCTGGCC GATGCGGCGC ACCAGCTCAA GACGCCGCTC
GCGGGCCTGC GCATGCAGGC CGACCTGGCG CAGCGCGAGG GCGCCAACGC CGACGAGCTC
AAGCAGTCGC TCAAGCAGAT CGGCCGCGCC AGCGTGCGCG CCACCCACAC GGTGAACCAG
CTGCTTTCGC TCGCGCGCGC CGAAAGCACC GGCGCCGGCA CCGGCCGCCA GGCCTGCGAC
CTGGCGCGGC TCACCATCGA GGTGGTGCGC GAAGCGGTGC CGCGCGCGAT CGAGAAGCGC
ATCGACCTGG GCTACGACGG CGCCGAGGCG GGCGCGCCCG GCGTGGTGAT CGAAGGCAAC
CAGACCCTGC TCAAGGAGCT GGTGCGCAAC CTGCTCGACA ACGCGATCAA CTACACGCCC
TCGACCGCCG AGCGGCCCGG CGTGATCACC GCGCGCGTGC TGGCCGACCC GTTCGGCCAC
GTGGTGCTGC TGCAGGTGGA GGACAACGGG CCGGGCATTG CGGAGTCCGA CCGCGAACTG
GTGTTCGAGC CGTTCTACCG CGTGCTCGGC AACGAGGCCG ACGGCTCGGG CCTGGGCCTG
CCGATCGTTC GCGAGATCGC CAACCAGCAC CATGCGCAAG TGAAGCTGGA GGACGCGCAT
CCGGGCCGGC AGCCGCCGGG GGCGCGCTTC ACGGTGCGCT TCGAGGGCGA AGAAGCCGCG
GCCTGA
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| Protein sequence | MKLFQRAQRS LFGEILDWML TPLLLLVPVS IGVTWLVAQG IANAPFDRAL EYNVQTLARL
VTVQQGQTQF VLPQPAREIL RADGADRVYY QVLDSHGALL SGEPDVPHPN SDEPPVPGVV
TLRNGEMRGK SVRVASLWLA GPDSDAEPAL LQVAETREKQ SVLATEIIKG VLLPQFAILP
LAVLLIWLAL VRGIKPLSVV EARIRERRPG DLSPLDESSV PLEVVPLVSS VNELLDKLND
SIHTQKRFLA DAAHQLKTPL AGLRMQADLA QREGANADEL KQSLKQIGRA SVRATHTVNQ
LLSLARAEST GAGTGRQACD LARLTIEVVR EAVPRAIEKR IDLGYDGAEA GAPGVVIEGN
QTLLKELVRN LLDNAINYTP STAERPGVIT ARVLADPFGH VVLLQVEDNG PGIAESDREL
VFEPFYRVLG NEADGSGLGL PIVREIANQH HAQVKLEDAH PGRQPPGARF TVRFEGEEAA
A
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