| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5189 |
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| Symbol | |
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| ID | 7969848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5512559 |
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| End bp | 5513359 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795783 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_002947057 |
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| Protein GI | 239818147 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0631] Serine/threonine protein phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAGTG TCGGCGCGTC CCTTTTCTCC ACCCGGCCCC AGCTCTCCTG GGACTTTGCG
GCGCTGACCG ACGTCGGCCG CGCGCGCGCC CACAACGAGG ACGACCTGCA CATCGACCCG
GCCCTCGGCC TGGCCGTGCT GGCCGACGGC ATGGGCGGCT ACAAGGGCGG CGAAGTGGCC
AGCGCCATGG CCGTGTCGCT GGTGCACGCC AGCTTTGCGC GCTGGTTCGC GCAGGCCGGC
CTGCAGGCGC CCGCGCGCGT GGTCCGGCGC GCCCTGCAGG CGGCCACCGA CGAGGCCAAT
TCCGCCATCC TCGAAGCCGG CCTTGCCAAT GCCGAACTCC AGGGCATGGG AACCACCCTG
GTGCTGGCCG CGTTCCGGCC GCAGCGCGTG CTGGTCGGCC ACATCGGCGA TTCGCGCTGC
TACCGCCTTC GCAACAACAA GCTCGAGCAG CTCACGCGCG ACCATTCACT GCGCCAGCAG
CAGCTCGACG CCGGCGCCAT CACCGCCGAG GAGGCGCTGA TCTCCCCGCA CCGCAACCTC
GTGACGCGCG CCATGGGCGT GGAGCCGCAG GTGGTGCTCG AGATGCACGA GCACACCGCA
AGGCCCGACG ACCTCTATAT GCTCTGCTCC GACGGGCTCA GCGAGATGGT CCCGGATGCG
CAGCTTTTCA CGCTTTTGAA TCACGATGTC GAGCTTCAGC AGAAAGCATC ACTTCTGGTG
GCCGTTGCCA ACGACAATGG CGGCCGAGAC AATATTTCAG TTGTCCTGGC CAGGGCGCGC
GTTGGCAGTG CGCCTGAATA A
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| Protein sequence | MASVGASLFS TRPQLSWDFA ALTDVGRARA HNEDDLHIDP ALGLAVLADG MGGYKGGEVA
SAMAVSLVHA SFARWFAQAG LQAPARVVRR ALQAATDEAN SAILEAGLAN AELQGMGTTL
VLAAFRPQRV LVGHIGDSRC YRLRNNKLEQ LTRDHSLRQQ QLDAGAITAE EALISPHRNL
VTRAMGVEPQ VVLEMHEHTA RPDDLYMLCS DGLSEMVPDA QLFTLLNHDV ELQQKASLLV
AVANDNGGRD NISVVLARAR VGSAPE
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