| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5186 |
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| Symbol | |
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| ID | 7969845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5508729 |
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| End bp | 5509532 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795780 |
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| Product | beta-lactamase domain protein |
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| Protein accession | YP_002947054 |
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| Protein GI | 239818144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.544063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGTTC GCGTGCTGGG TTGCTCGGGC GCCATTGCCA AGGACTGCCG GACCACCTCG
TTCCTGATCG ACACCGACCT GCTCGTCGAT GCGGGCACCG GCGTGGGCGA CCTCACGCTC
GAAGAAATGG CCGGCATTGA CGACGTGGTG CTCACCCACT GCCACCTCGA CCACATCGCC
GCGTTGCCCC TCATGCTCGA CGCCGTGGGC GGCCGCCGCA CCCGCTCGCT GCGCGTGCAT
GCGCTGCGCG CCACCATCGA GGCGCTGCGC GCCCATGTGT TCAACAACGT CATCTGGCCC
GACTTCGAGA GCATTCCCAG CCCCGAGGCC CCCTTCGTGA GCTTTCACGA CATTGCCGTG
GGCCAGGTGC TGCAACTGGG CAGTGCCGCC CCCAAGCGCA TCGAGGTGCT GCCGGCCGTG
CACACCGTGC CCGCCTGCGG CTTTGCCGTA AGCCGCGCCG AGGGCGGCGC CAACTGGGTC
TTCACCGGCG ACACCGAGCG CAACACCCCC TTCTGGGACC GCCTCAACGC CCTGGACGTG
GCCATGCTCG TCATAGAAAC GGCGTTCAGC AACCGCGAGC AGGCCCTGGC CGAACGCAGC
CTGCACCTGT CGCCCCGCGC CCTGGCCGAC GAGCTGGCGC ATATCGATCC GGGCAAGCAG
TTTCCGATCT ACATCACCCA CACCAAGCCG GCGGAAACCG AAGAGATCAT GTGGCAAATC
GAGCATCTGG CCGGGCACCA GGTGGCGGGG CTGGCGCAGC GGGATATCCG GTGGTTGAAG
GCGAATGGGG TGCTGACGTT TTGA
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| Protein sequence | MQVRVLGCSG AIAKDCRTTS FLIDTDLLVD AGTGVGDLTL EEMAGIDDVV LTHCHLDHIA
ALPLMLDAVG GRRTRSLRVH ALRATIEALR AHVFNNVIWP DFESIPSPEA PFVSFHDIAV
GQVLQLGSAA PKRIEVLPAV HTVPACGFAV SRAEGGANWV FTGDTERNTP FWDRLNALDV
AMLVIETAFS NREQALAERS LHLSPRALAD ELAHIDPGKQ FPIYITHTKP AETEEIMWQI
EHLAGHQVAG LAQRDIRWLK ANGVLTF
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