| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5171 |
|---|
| Symbol | |
|---|
| ID | 7969830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 5493170 |
|---|
| End bp | 5493475 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644795765 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002947039 |
|---|
| Protein GI | 239818129 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCC TTGCCCAGGC TCCGAACCTC GCGATCGCCG CGCTGTGGGT GCATGCGCTG
CGGGAGGAGG GCGTGGAGGC GACGGTGCAG CGCGAATACC TGGGCGCCGT CATGGGCCAG
CTGCCGCCCG ATCAGTGCCT GCCCGAGATC TGGATCGACG ACGAAACCCA GTTCGAGCGC
GCACAGCAGG TGCTGCATGC GGCGCAGCAC CGGCCGCAGC GCAACTGGCA GTGCGCCTGC
GGCGAGCGCA TCGAAGGCGG CTTCGAGCAG TGCTGGCACT GCGGCGCGAT GATGCCGGTG
GCCTGA
|
|---|
| Protein sequence | MRRLAQAPNL AIAALWVHAL REEGVEATVQ REYLGAVMGQ LPPDQCLPEI WIDDETQFER
AQQVLHAAQH RPQRNWQCAC GERIEGGFEQ CWHCGAMMPV A
|
|---|
| |