| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5167 |
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| Symbol | |
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| ID | 7969826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5487698 |
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| End bp | 5489077 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795761 |
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| Product | adenylosuccinate lyase |
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| Protein accession | YP_002947035 |
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| Protein GI | 239818125 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0015] Adenylosuccinate lyase |
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| TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.518617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTCT CCACCGTTTC CGCCCTCTCC CCACTTGATG GCCGCTATGC GGCCAAACTC
GCGGCCTTGC GCCCGCTGAT GAGCGAACAG GGCTACATGC ACCGGCGCGT GCAGGTCGAA
GTGGCGTGGT TCATCGCGCT GTCGGACTGC GGCTTTGCCG AATTCAAGCC GCTCACGGGC
GGTGCCCGCA AGTACCTGCT GGGGCTGGTT TCGCACTTCT CCGAGGCCGA CGCGCTGGCC
ATCAAGGACA TCGAGAAGAC CACCAACCAC GACGTCAAGG CGGTCGAATA CTGGATCAAG
TCCAAGTTCG AAGCCCGCCC CGAGCTGCTG GCCGCCGCCG AATTCGTGCA CTTTGCCTGC
ACCAGCGAAG ACATCAACAA CACCAGCCAT GCGCTGCAGA TCCAGGCCGC GCGCGAAAAG
GTCATGCTGC CGGCCATCGA CGGGCTGATT GCCAAGCTGC GCGAAATGGC GCACCAGTTC
GCCGGCGTCT CGATGCTGTC GCGCACGCAC GGCCAGACCG CGAGCCCCAC CACCGTGGGC
AAGGAAATCG CCAACGTGGC GGTACGGCTC TCGAAGGCGC GCGCGCAGAT CGCTTCCGTG
CAGCTGCTCG GCAAGATGAA CGGCGCCGTG GGCAACTACA ACGCCCACCT GGCGGCCTGG
CCCGACTTCG ACTGGGAGGC GTTCAGCCGC AAGGTGATCG AAACGCCGGC GCCGCTCGGC
CTGGGCCTGA GCTTCCAGCC CTACAGCATC CAGATCGAGC CGCACGACTA CATGGCCGAG
CTGTTCGACG CGGTGGCGCG CGCCAACACC ATCCTGATCG ACTTCTCGCG CGACGTCTGG
GGCTACGTGA GCCTGGGCTA CTTCAAGCAG CGGCTCAAGA AGGGCGAGAT CGGCTCCTCG
ACCATGCCGC ACAAGGTCAA CCCGATCGAC TTCGAGAATG CCGAAGGCAA CCTGGGCCTG
GCCAACGCGG TGCTGCGCCA CCTGAGCGAG AAGCTGCCGA TCAGCCGCTG GCAGCGCGAC
CTGACCGACA GCACGGTGCT GCGCAACATC GGCGTGGCCT TCGGCTATGC CACGCTGGCC
TACGCGAGCC TGGCCACGGG CCTGGGCAAG CTGGAGCTCA ACCAGGAAGC GCTGGCCGAA
GACCTCGACG CCTCGTGGGA AGTGCTGGCC GAGCCGATCC AGACGGTGAT GCGTCGCTTC
GGCGTGCAGG GCGCCTACGA GCAGCTCAAG GAAGTGACGC GCGGCAAAAC CGTGACGGCC
GAGGCGCTGC ACGGCCTGAT CCGCTCGCTC GACATTCCCG AAGCGGAAAA GGAACGCCTG
CTGGCCATGA CGCCCGCGAG CTACGTGGGC AAGGCGGCGG AGCTCGCCAG TAGAATCTAG
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| Protein sequence | MSFSTVSALS PLDGRYAAKL AALRPLMSEQ GYMHRRVQVE VAWFIALSDC GFAEFKPLTG
GARKYLLGLV SHFSEADALA IKDIEKTTNH DVKAVEYWIK SKFEARPELL AAAEFVHFAC
TSEDINNTSH ALQIQAAREK VMLPAIDGLI AKLREMAHQF AGVSMLSRTH GQTASPTTVG
KEIANVAVRL SKARAQIASV QLLGKMNGAV GNYNAHLAAW PDFDWEAFSR KVIETPAPLG
LGLSFQPYSI QIEPHDYMAE LFDAVARANT ILIDFSRDVW GYVSLGYFKQ RLKKGEIGSS
TMPHKVNPID FENAEGNLGL ANAVLRHLSE KLPISRWQRD LTDSTVLRNI GVAFGYATLA
YASLATGLGK LELNQEALAE DLDASWEVLA EPIQTVMRRF GVQGAYEQLK EVTRGKTVTA
EALHGLIRSL DIPEAEKERL LAMTPASYVG KAAELASRI
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