| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5161 |
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| Symbol | |
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| ID | 7971532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5482413 |
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| End bp | 5483588 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644795755 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_002947029 |
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| Protein GI | 239818119 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTGAGC GCGCACTCTC CTTTTCCACC CCCGCGCTGG CGGCCTGCGC GGTGGCCGTC
GCCGTCCTCC TTGCGGGCTG CGCGAGCGGC ACGCGCAGCG GCGGTGGCGC ACTGAGCGGC
CGCGACGGCC CGGGCAGCAA CATCCCGTCC GACCTGGACC GCGTACCCGA CGCCGAGCCC
CGCATCGAAG CCATCCGCGG CAGCGGCGGC ACCAGCAAGC CCTACACGGT GCTGGGCCGG
GCCTACCAGC CGATCACCGA CGACCGGCCG TTCCGCGAAT CGGGCATCGC CTCGTGGTAC
GGCCGCAAGT TCCACAGCGC CTCGACCGCG AGCGGCGAGC CCTACGACAT GTACGCCATG
ACGGCCGCGC ACAAGACGCT GCCGCTGCCC AGCTACGTGC GGGTGCGCAA CCCGGCCAAC
GGGCGCGAGG TGATCGTGCG GGTGAACGAC CGCGGGCCCT TCGTCGACGG CCGCATCATC
GACCTGAGCT ACACGGCGGC GCTCAAGCTC GACCTGCTGC GCGGCGTGGC GCCGGTGGAA
ATCGAGCGCA TCACGAACGA GGACATCCGC ACGGGCGCGT GGCGGCGCGA TGCGGGGACG
GCCTATGCCT CGGCCTCGCA GGCGCCTGCG CCGGCGCAGC CCCAGCGCGT GGCGGCTGCA
CCGGTGGCCG TGCCCTCGGC CTGGGTGGCG CCGGTGGCGA TGAACGCTGC AGCGCCGGCC
TCGGCGACGC CGGTCGCGCC GCAAACGCCC ATGGCATCCA CGGCGCCCGA CGACCGGATC
GCGCAGGCCG CGCCGGCGCC CGAGCCGGAG GCCGCATCGC CGCGCCAGCC GATCATGGTC
AGCGAGCTGC CGCCGATGGC GCCGCTCACC GCCCCGCCAC CGGCGCCGCG GGCCGCCGCA
TCGCAGGACT CTGCGCCCTC CTCCTCGCCC GCGGCCGCGG CCGCGGGCTT CTGGGTGCAA
CTCGGCGCCT TCCGCGAGCG CGATGGCGCC GAGAGCCTGC GCAGCCAGGC CGCGCGCGGA
CTGCCCACGC TGGCGCCGCA GCTGCGCGTG TTCAGCGAAG CCGGCACACA CCGCCTGCAG
GCCGGGCCCT TCGCCTCGCG CAGCGAAGCC GGCGAGGCCG TCACGCAGCT GCGCGAGAGC
CTGCGCATCG CGCCGATGGT GGTCGAGCGC CGCTGA
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| Protein sequence | MAERALSFST PALAACAVAV AVLLAGCASG TRSGGGALSG RDGPGSNIPS DLDRVPDAEP
RIEAIRGSGG TSKPYTVLGR AYQPITDDRP FRESGIASWY GRKFHSASTA SGEPYDMYAM
TAAHKTLPLP SYVRVRNPAN GREVIVRVND RGPFVDGRII DLSYTAALKL DLLRGVAPVE
IERITNEDIR TGAWRRDAGT AYASASQAPA PAQPQRVAAA PVAVPSAWVA PVAMNAAAPA
SATPVAPQTP MASTAPDDRI AQAAPAPEPE AASPRQPIMV SELPPMAPLT APPPAPRAAA
SQDSAPSSSP AAAAAGFWVQ LGAFRERDGA ESLRSQAARG LPTLAPQLRV FSEAGTHRLQ
AGPFASRSEA GEAVTQLRES LRIAPMVVER R
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