| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5160 |
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| Symbol | |
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| ID | 7971531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5479625 |
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| End bp | 5482420 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644795754 |
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| Product | (Glutamate--ammonia-ligase) adenylyltransferase |
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| Protein accession | YP_002947028 |
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| Protein GI | 239818118 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCA GCATTCAGAG GGGTTCCACG GAAACCAACA CCAGTGTGAA CCAGTTGCCA
GCCACGCCAT CGACAGAAGC GACCGAGGTC GCGTTCTCTT CCTATTCGCG CTTCGTCCAG
CGCCTGCGCC GCAGGTATGC GGCCGAGCTT GCATTGCTTT CCCCTGGCGC GCCGCGGCGC
GAGTCGATGT CGAAGGCCTA CGAGGCACTG CGCGAACGCG GGGACGGCGT CGGCGATGCG
CTGCGCATTG TGCGGCAGCT CGTGATGGAA CGCCTGGTCA CCCTCGATTG CGACGCCAAC
GCGCCGCTGG CCGTGGTGAC CACCGCCGTG ACCGAGCTCG CGGAATTCGC GCTCGACGTC
GCCTGCCGCG ACGCCTGCCA GGAACTCGAC GCAGTGCACG GCGCGCCGCT CGGCCCCGAG
GGCCAGCGCG CGCAGCTCTG GGTGGTGGGC ATGGGCAAGC TCGGCGCGCG CGAGCTCAAT
GTGTCGAGCG ACATCGACCT GATCTACCTC TACGACCTGG ACGGCGAGAC CCGCGGCGAT
GCCGACGGCC GCGGCCGCCT CTCCAACCAG GAGTATTTCT CGCGCGCCGT GAAGCGCATC
TATGCGCTGG TGGGCGACGT CACCGAGCAC GGCTTCGTGT TCCGCGTCGA CCTGGCGCTG
CGGCCGAACG GCAACTCCGG GCCCAGCGTG GTGTCGCTCG ATGCGCTCGA GGAATATTTC
CAGGTGCAGG GCCGCGAGTG GGAGCGCTTT GCCTGGATGA AGAGCCGGGT GGTCGCGCCG
CGCGACATCG TTGCGGACGG CCTTGCGCAG GGCCTGCGCG CCACCGTGCT GCCCTTCGTG
TTCCGCCGCT ACCTGGACTA CAGCGTGTTC GATTCGCTGC GCACGCTGCA CCGGCAAATC
CGCGAGCAGT CGGCCCGCCG CAGCGCGGGG CGGCCCGAGC GCGCCAACGA CGTCAAGCTC
TCGCGCGGCG GCATCCGCGA GATCGAATTC ACCGTGCAGC TGCTGCAGGT GGTGCGCGGC
GGCCAGTTCC CCGAGCTGCG CACCCGCCCC ACGCTCGACG CCCTGCAGCG GCTCGCGCGC
GCCGGCCTGA TGCCGCAGGA AACCGCCGAC ACGCTGGCTG CGGCCTATGA ATTCCTGCGC
CGCGTGGAGC ACCGCATCCA GTACCTGGAC GACCAGCAGA CCCACGTGCT GCCGGTGGCT
GACGACGACC TGCGCTGGAT CGCGCAGACC ATGGGCTACG CCGGCTGCTG CCCCTTCCTC
GAGCAGCTCG ACACGCACCG CGAGTTCGTG GCGCAGGAGT TCGACAAGCT GCTCGGCGGC
GAGAAACCCT GCAACGGCAA GTGCAACGGC AAGAAGGCTG CCGCCCCCGC CGACCTGGCC
GACCTGCTCG GCGACCTGCC GCCGGCCTTT GCCGACCGCA TCCGCAACTG GTGCGAGCAG
CCCCGCGTGC TGGCGCTGCG CGAGGAAACG CGCGCACGGC TGCGCCAGCT GGTGCAGCGC
ACCGGACAGT GGCTGAAGGA GCCCGACGGC GACGGCCCCG GCCAGACGCC GCGCCATGTG
GACGCCGCGC TGCGCTGGGC CGACTGGATC GAGCCGCTGC TGCGGCGCGA GAGCTACCTG
GCGCTGCTGG TCGAGCGGCC CGCGGTGCAG GAACGGCTGC TGCGGCTGCT GGGCGCCGCG
AAGTGGCCCG CGCGCTACCT GATGCAGCAC CCGGGCGTGA TCGACGAGCT CGCAAGCGAC
GAAATGCTCT CGGGCCGTTT CATGGCCGCC GAGTTCGAGC GCGAGCTCGA GGCGCGCCAC
GCCTCCCTCA GTCGCACCGG CGAAGCCGAC GAGGAGCGCC TGCTGAACCT GCTGCGCCAC
GCCCACCACG CCGAGGTGTT CCGCACGCTG GCGCGCGACG TGGACGGGCG GCTCACGGTG
GAGCAGGTGG CCGACGACCT GAGCGCGCTG GCCGACATCA CGCTGCGCGT GACCGCCCAT
TGGTGCTGGC CGCACGTGCG CAACAGGCAC CGCGAGCTGC CGCAGTTCGC CATCATCGGC
TACGGCAAGC TCGGAGGAAA GGAACTGGGC TACGGCAGCG ACCTCGACAT CGTGTTCGTC
TACGAGGACG ACGACGAGCG CGCGGGAGAG GTCTATGCAG CCTACGTGCG CAAGCTGATC
AACTGGCTCA CCGTGAAGAC GCGCGAAGGC GACCTGTTCG AGATCGACAC CGCCCTGCGG
CCGAACGGCA ATTCGGGCCT GCTGACCACG AGTTTCGAAG CCTACGAGCG CTACCAGCTC
GGACGCGGCA GCAATACGGC ATGGACCTGG GAGCACCAGG CCATGACCCG CGCAAGATTC
GTGCTCGGCA GCGCCGAACT CGGCACGCGC TTCGACCAGG TGCGCGAAGC CGTGCTGGTG
GCGCCGCGCG ACCGCGAGGC GCTCAAGGCC GAGATCATCG CCATGCGCAA CAAGCTGCGC
GGCGCGCGGC CGGTGAAGGC CGATCGCTTC GACGTCAAGC ACAGCCCCGG CGGCATGGTC
GATGCCGAGT TCGCGGTGCA GTTCCTGGTG CTGTCGGCCT CGGGCGAGCA TCCGGAGCTG
ATTCCCAACG TCGGCAACAT CGCGCTGCTG CTGCGCGCGG AAGAAGCCGG CCTGCTGCCC
GCCGGCGTTG GCCGCAACGC CGCCGCGGCG TATCGCGAAC TGCGCCGCGT GCAGCACCGC
GCGCGCCTCA ACGAAGAACC GACCCAGGTC ACCCCGCCCG CACTGGCCGC CGAGCGCGAC
GCCATGCTGG CGCTATGGAA GGCGGTATTT GGCTGA
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| Protein sequence | MTASIQRGST ETNTSVNQLP ATPSTEATEV AFSSYSRFVQ RLRRRYAAEL ALLSPGAPRR
ESMSKAYEAL RERGDGVGDA LRIVRQLVME RLVTLDCDAN APLAVVTTAV TELAEFALDV
ACRDACQELD AVHGAPLGPE GQRAQLWVVG MGKLGARELN VSSDIDLIYL YDLDGETRGD
ADGRGRLSNQ EYFSRAVKRI YALVGDVTEH GFVFRVDLAL RPNGNSGPSV VSLDALEEYF
QVQGREWERF AWMKSRVVAP RDIVADGLAQ GLRATVLPFV FRRYLDYSVF DSLRTLHRQI
REQSARRSAG RPERANDVKL SRGGIREIEF TVQLLQVVRG GQFPELRTRP TLDALQRLAR
AGLMPQETAD TLAAAYEFLR RVEHRIQYLD DQQTHVLPVA DDDLRWIAQT MGYAGCCPFL
EQLDTHREFV AQEFDKLLGG EKPCNGKCNG KKAAAPADLA DLLGDLPPAF ADRIRNWCEQ
PRVLALREET RARLRQLVQR TGQWLKEPDG DGPGQTPRHV DAALRWADWI EPLLRRESYL
ALLVERPAVQ ERLLRLLGAA KWPARYLMQH PGVIDELASD EMLSGRFMAA EFERELEARH
ASLSRTGEAD EERLLNLLRH AHHAEVFRTL ARDVDGRLTV EQVADDLSAL ADITLRVTAH
WCWPHVRNRH RELPQFAIIG YGKLGGKELG YGSDLDIVFV YEDDDERAGE VYAAYVRKLI
NWLTVKTREG DLFEIDTALR PNGNSGLLTT SFEAYERYQL GRGSNTAWTW EHQAMTRARF
VLGSAELGTR FDQVREAVLV APRDREALKA EIIAMRNKLR GARPVKADRF DVKHSPGGMV
DAEFAVQFLV LSASGEHPEL IPNVGNIALL LRAEEAGLLP AGVGRNAAAA YRELRRVQHR
ARLNEEPTQV TPPALAAERD AMLALWKAVF G
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