| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5158 |
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| Symbol | |
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| ID | 7971529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5474583 |
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| End bp | 5475398 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795752 |
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| Product | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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| Protein accession | YP_002947026 |
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| Protein GI | 239818116 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.582851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTCG CAGCCATCCA GATGGTGTCG GCCATCGCCC GCGAAGCCAA CCTCGCGCGC
GCCCACGGCC TGCTCGCGCA AGCCGCCGCG GCCGGCGCCG AGCTGGCGGT GCTGCCCGAG
TATTTCTGCA TGATGGGCGC GCGCGATACC GACAAGCTCG GCCTGCGCGA GACCGCCGGC
GCGGGCACCG TGCAGGGCTT TCTGGCCGAT GCGGCGCGCG AGTTCGGGCT CTGGATCGTG
GGCGGCACGC TGCCCATCGA AAGCGGCGAC GCCGAGCACG TGTTCAACAG CTCGCTGTGC
TATTCGCCCG ACGGCCAGTG CGTGGCGCGC TACGACAAGA TCCATCTCTT TTTCTTCGAC
AACGGCAGCG AGCACTACGA CGAGCGCCGC GTCATCGCGC CGGGCGCCGA GCCCGTGATG
TTCGAGCTGC CCTCGCGCGA CGGCCACCGC TGGCGCGTGG GCATGAGCGT GTGCTACGAC
CTGCGCTTTC CCGAGCTGTA CCGCGCGCTC GCCAAGCGCG GTGCCGAGCT GCTGCTGGTG
CCCAGCGCCT TCACCCGCAC CACGGGCGCC GCGCACTGGG AGGTGCTGCT GCGCGCGCGG
GCCATCGAGA ACCTGGCCTG GGTGGTGGCG CCCGCGCAGG GCGGCACGCA CGAGAACGGC
CGCCACACCT GGGGCCAGTC GATGGTGGTC GATCCCTGGG GCACGGTGGT GGCGCAGCAG
GCGAGCGAAG AAGGCGTGGT GCTGTTCGAC CTGGACGCCG GGCAGATCGA GCGCGTGCGC
GCGCAGCTGC CCGTGCTCTC GCACTGCGTG CTCTAG
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| Protein sequence | MKVAAIQMVS AIAREANLAR AHGLLAQAAA AGAELAVLPE YFCMMGARDT DKLGLRETAG
AGTVQGFLAD AAREFGLWIV GGTLPIESGD AEHVFNSSLC YSPDGQCVAR YDKIHLFFFD
NGSEHYDERR VIAPGAEPVM FELPSRDGHR WRVGMSVCYD LRFPELYRAL AKRGAELLLV
PSAFTRTTGA AHWEVLLRAR AIENLAWVVA PAQGGTHENG RHTWGQSMVV DPWGTVVAQQ
ASEEGVVLFD LDAGQIERVR AQLPVLSHCV L
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