| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5151 |
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| Symbol | |
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| ID | 7971522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5466649 |
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| End bp | 5468916 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795745 |
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| Product | protein of unknown function DUF839 |
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| Protein accession | YP_002947019 |
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| Protein GI | 239818109 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA ACACCCGTAC CGACGACAAC GGCATCGATC TTGACGACGT TGGCACCAAT
CCCACTGCGA ACCCCTCATT CACCGACCTG ATCGCTTCGC GCCTCAGCCG TCGCCATCTG
TTCGGCCTGG GCGTCGGCAC CGCCGGCACC GCGCTGCTGC AGGCGTGCGG CGGCGGTGGC
GGCGGCGGCA CGGCTTTCCC GATCATTCCG CCCGCACCGG CACCCGCTCC CGCTCCCGCG
CCGGCGCCTG CACCGACCCC CGCACCGGCG CCCACGCCGA TGAAGCTCGG CTTCAATGCC
GTGGCCAAGG GCCTGGCCGA CGTGGTCACC GTGCCCGCCG GCTACACCGC CAGCGTGCTC
TATCGCCTGG GCGACCCGAT CGCCGCGGGC GTGGCCGCCT ACAAGAACGA CGGCACCGAC
GATCCGGCCA CCTACGACCG GCGCGCCGGC GACCACCACG ACGGCATGAC CTTCTTCGGC
ATGAACGCGT CGAACAAGTG GGACGCCGCC AACGCGTCGC GCGGCCTGCT CGTGATGAAT
CACGAAGCCA TCACGCCGCT GTTCCTGCAC CCCGCCGGCC AGACCATCAG CGGCACCGGC
AATGCGGCGG TGCGCACCTC CGCCGACGAA GTGCTGCGCG AGTTCTACCT GCACGGCGTG
AGCGTGATCG AGATCAACAA GAGCGGCAGC GCCTGGAGCT ACAAGCAGGA CTCGAGCTTC
AACCGCCGCG TCCACACGCT GACCGAAATG GCGTTCTCGG GCCCCGCCGC CAAGACCGAC
TACCTGAAGA CCAAGTACTC GACCGACGGC AGCAAGACCC GCGGCACGCT CAACAACTGC
GCCAACGGCA CCACGCCCTG GGGCACCTAC CTGACCTGCG AAGAAAACTG GGCCGGCTAT
TTCCGCCGCA TCAAGGCCAC CGACGACCCC AGCCGCACGG CGAAGGAAAT CGCCGCGTTC
ACCCGCTACG GCGTGGCCAG CACCGGCCGC GAACTCTGGG CCACCGTCAC GCCCGACACG
GCCGACAACC TCTATGGCCG CTGGAACGCC CAGGTGGTCG GCGCCACCGC CACCGACGAC
TTCCGCAACG GCGCCAACAC CTACGGCTGG GTGGTCGAGA TCGATCCCTT CAACCCCGCC
AGCACCCCCA AGAAGCGCAC CGCGCTCGGC CGCTTCGGCC ATGAAGGCGC CTGCCTCGGC
CCGGTCGTGG TCGGCAAGCC GCTGGTCTGG TACATGGGCG ACGACTCGCG CAACGAGTAC
ATCTACAAGT TCGTCTCGAC GAAGAACTGG GATGCGGCCG ACGTGGGCGG CGGCACCGCG
GCCGGCGACA AGTACATGGA CGACGGCCGC CTCTACGTGG CCAAGTTCAA CGCCGACGGC
ACCGGCGCGT GGCTCGAGCT GAAGCTCGGC GTGAACAACA TCACCGCGAG CAATCCGGCC
TACGCCTTTG CCGATGCCGC CGACGTGGTG GTCAATGTGC GCCTCGCGGC CGACGCCGCC
GGCGCCACAA GGATGGACCG CCCCGAGTGG ACGGCCGTCA ACCCGAAGAC CGGCGAGGTC
TACGTCACCC TCACCAATAC CAACGCCGCA TCGCGCCCCA TCACCGCCAC CGACGGCGCC
AACCCGCGCT TCTACAACGA CCCCAAGGGC CCCACCGCCA CCGCGCAGAC CGGCAACCCC
AACGGCCACA TCGTGCGCTT TGCGGACGAG GGCGGCGACC CCGCCGCGCT GGCCTTCAAG
TGGGACGTGT ACCTGTTCGG CGCGCGCGCC ACCGCCTCGG CCGACATCAA CGTGTCGCAA
CTGAGCGCCG ACAACGACTT CTCCAGCCCC GACGGCATGT GGTTCAGCCA CGCCACCGCC
GGCCTGCTCT GGCTGGAGAC CGACGACGGC GCCTACACCG ACGTCACCAA CTGCATGCTG
CTGGCCGCGC TGCCGGGCAA GGTCGGCGAC GGCGGCGCCA GGACCATCAC CAACGTCGAC
GGCGCCACCA CGCGCACGCA GGACACCTTC GTGGGCAAGG CGCCCGGCGC CGACGGCCTG
CGCCGCTTCC TGGTCGGCCC GAAGGATTGC GAGATCACCG GCATTGCCGA GTCGGGTGAC
GGCCGCGCGC TGTTCGTGAA CATCCAGCAT CCGGGCGAAA CCACTCCCGC GGCGAGCATC
GGCGACCCGA CCAAGTTCGG CAGCCATTGG CCCGAAGGCG GCAGCGCCCG CCCGCGCTCG
GCCACGGTGG TCATCACCAG GGACGACGGC GGCCTGATCG GCCTCTGA
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| Protein sequence | MTANTRTDDN GIDLDDVGTN PTANPSFTDL IASRLSRRHL FGLGVGTAGT ALLQACGGGG
GGGTAFPIIP PAPAPAPAPA PAPAPTPAPA PTPMKLGFNA VAKGLADVVT VPAGYTASVL
YRLGDPIAAG VAAYKNDGTD DPATYDRRAG DHHDGMTFFG MNASNKWDAA NASRGLLVMN
HEAITPLFLH PAGQTISGTG NAAVRTSADE VLREFYLHGV SVIEINKSGS AWSYKQDSSF
NRRVHTLTEM AFSGPAAKTD YLKTKYSTDG SKTRGTLNNC ANGTTPWGTY LTCEENWAGY
FRRIKATDDP SRTAKEIAAF TRYGVASTGR ELWATVTPDT ADNLYGRWNA QVVGATATDD
FRNGANTYGW VVEIDPFNPA STPKKRTALG RFGHEGACLG PVVVGKPLVW YMGDDSRNEY
IYKFVSTKNW DAADVGGGTA AGDKYMDDGR LYVAKFNADG TGAWLELKLG VNNITASNPA
YAFADAADVV VNVRLAADAA GATRMDRPEW TAVNPKTGEV YVTLTNTNAA SRPITATDGA
NPRFYNDPKG PTATAQTGNP NGHIVRFADE GGDPAALAFK WDVYLFGARA TASADINVSQ
LSADNDFSSP DGMWFSHATA GLLWLETDDG AYTDVTNCML LAALPGKVGD GGARTITNVD
GATTRTQDTF VGKAPGADGL RRFLVGPKDC EITGIAESGD GRALFVNIQH PGETTPAASI
GDPTKFGSHW PEGGSARPRS ATVVITRDDG GLIGL
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