| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5147 |
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| Symbol | |
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| ID | 7971518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5461046 |
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| End bp | 5462368 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644795741 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002947015 |
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| Protein GI | 239818105 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.444921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTCCT CCACCCTACC GGTCGGCGCA CTGCCCGTGC CCGCCGACAC CGCGCTCGAG
AAGCGCACCT ATGCCAAGGT GTTCTGGCGC CTGGTTCCCT TTTTGATGCT GTGCTACGTG
GTCGCCTACC TCGACCGCGT GAACGTGGGC TTTGCCAAGC TGCAGATGGG GCAGGACCTG
GGCTTCAGCG AAACGGTGTT CGGCCTGGGC GCGGGCATCT TCTTCCTCGG CTACTTCCTG
TTCGAGGTGC CGAGCAACCT GCTGCTCAAC CGGGTGGGCG CGCGCATCTG GATCGCGCGG
ATCATGATCA CCTGGGGCGT GCTGTCGGCC TGCTTCGTGT TCGTGGAAAC GCCGAGCAGC
TTCTACATCC TGCGCTTTCT GCTCGGCGTG GCGGAAGCGG GCTTCTATCC CGGCGTGATC
CTCTACCTCA CGCACTGGTA TCCGGCGCAC CGGCGCGCGC GGATCATCGC GGTGTTCATG
TCGGCCATTC CGGTGGCGGG CATCTTCGGC AATCCGCTGT CGGGCTGGAT CATGGACGCC
TTCCACGGCG TGTCGTCGAT GCACGGCTGG CAGTGGATGT TCATCATCGA GGCCGTTCCG
GCCGTGCTCG TCGGCGTGAT GGTGCTGCTC TACCTGGACA ACGGCATCCA GCATGCGCGC
TGGCTCTCGC CCGAGGAAAA GAGCCTGCTG CAGCGCGAGG TCGAGCGCGA CCAGGCGCAT
GGCGCCAAGG GCCCGCACTC GGTGGCCGCC ATGTTCCGCG ACATGCGCGT GTGGCGGATG
GCGCTCATCT ACTTCGCCTT CGTGATGGGC CAGTACGCGC TCACCTTCTG GCTGCCCACG
CTGGTCAAGG CCACGGGCGT GAAGGGCAAC CTGCACATCG GCCTTTTGAG CGCCATTCCG
TTCATCTGCG CGATCGTCGC GATGAATCTC TTCGGCCGCA GCGCCGACCA CCGGCAGGAG
CGGCGCTGGC ACCTGATCGT GCCGGCGCTG ATGGGCGCGG TGGGCTTCAC GGTGGCGGCG
TCGTACACGC AGAACACGGT CGTGTCGCTG GCCTTCCTCT CGCTCGCGGC AGCCGGCGTG
CTGACCTGCG CGCCGCTCTT CTGGTCGCTG CCCACCGCCT TCCTCTCGGG CACGGCGGCG
GCGGCCGGCA TTGCGGCCAT CAATTCGGTG GGTAATCTTG CGGGGTTCGC GAGCCCCTAC
CTCATCGGCT ACCTGAAGGA CCTGACGGGC AGCACGCAGA TCGGCATGTA CGTGCTGGCC
GGTGCGCTGG TGCTCGGGGC CATCGGCGTG TGGCTCACGC CCAAGCAACT CGTCAACAGA
TGA
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| Protein sequence | MTSSTLPVGA LPVPADTALE KRTYAKVFWR LVPFLMLCYV VAYLDRVNVG FAKLQMGQDL
GFSETVFGLG AGIFFLGYFL FEVPSNLLLN RVGARIWIAR IMITWGVLSA CFVFVETPSS
FYILRFLLGV AEAGFYPGVI LYLTHWYPAH RRARIIAVFM SAIPVAGIFG NPLSGWIMDA
FHGVSSMHGW QWMFIIEAVP AVLVGVMVLL YLDNGIQHAR WLSPEEKSLL QREVERDQAH
GAKGPHSVAA MFRDMRVWRM ALIYFAFVMG QYALTFWLPT LVKATGVKGN LHIGLLSAIP
FICAIVAMNL FGRSADHRQE RRWHLIVPAL MGAVGFTVAA SYTQNTVVSL AFLSLAAAGV
LTCAPLFWSL PTAFLSGTAA AAGIAAINSV GNLAGFASPY LIGYLKDLTG STQIGMYVLA
GALVLGAIGV WLTPKQLVNR
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