| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5136 |
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| Symbol | |
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| ID | 7971507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5450875 |
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| End bp | 5451903 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644795730 |
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| Product | NMT1/THI5 like domain protein |
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| Protein accession | YP_002947004 |
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| Protein GI | 239818094 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACGTTC CCGCTCTGAC CATCCGTCCG CTTGCCCTAG CCCTCGCCCT CGCGGCCGCC
GCCTTCGCCG CACAGGCGCA GGAAAAAGTG GTGTTCGCCA CCAACTGGAA GGCGCAGGCT
GGCCACGGCG GCTTCTACCA GGCGCTGGTG GACGGCACCT ACAAGAAGTA CGGCCTCGAC
GTCGACATCC AGCAGGGCGG ACCCATGGTC AACAACCGGC CCATGCTGCC GGCCGGCAAG
ATCGACTTCC TCATGACCGG CAACCTGCTG CAGTCCTTCG ACAACGTGAA GAACGGCGTG
CCCACCGTCG TGGTCGCGGC CTTCTTCCAG AAAGACCCGC AGGCCATGTT CGCGCACCCG
GGCCAGGGCT TCGACACCTT CAAGGACATG GCCAAGGCGC CCGTGGCCTT CATCGGCAAG
GATGGCCAGT TCAGCTTCTG GCAGTGGATG AAATCGGAGC ACGGCTTCAA GGATTCGCAG
CTCAAGCCCT ACACCTTCAA CGTGGGCCCG TTCCTCGCGG ACAAGAAATC CATCCAGCAG
GGCTACGCCA TCTCCGAGCC GCTTTCCATC AAGGCCCAGG CCGGCTTCGA TCCGGTGGTG
CAGCTGCTGG CCGACAACGG CTTCTCGACC TACTCGACCA CCATCGAGAC GCGCGCCGAC
CTCGTCAAGA CCAAGCCCGA GACCGTGCGC AAGTTCGTCG AGGCCTCGAT CATCGGCTGG
AACAACTACC TCTACGGCGA CAACAAGGCC GCCAACGAGA TGATCGCCAA GATCAACCCC
GACTCCCCCG TCGCCGCGTC CCAAGGCTCC ATCGAACTCA TGAAGAAGAT GGGCATCGTC
GACAGCGGCG AATCGCTCGC CAAGGGCATC GGCGCAATGG ACGAGGCCCG CGTGAAGGAC
TTCTACGACA AGATGGTGAA GGCCGGCCTC TACAAGCCGG GCGAGGTCGA CCTCTCGAAG
GTCGTGACCA CGCAGTTCGT CAACAAGGGC GTCGGCCTCG ACATCCGCAA GAAGCTCGCC
GGCAAGTAA
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| Protein sequence | MHVPALTIRP LALALALAAA AFAAQAQEKV VFATNWKAQA GHGGFYQALV DGTYKKYGLD
VDIQQGGPMV NNRPMLPAGK IDFLMTGNLL QSFDNVKNGV PTVVVAAFFQ KDPQAMFAHP
GQGFDTFKDM AKAPVAFIGK DGQFSFWQWM KSEHGFKDSQ LKPYTFNVGP FLADKKSIQQ
GYAISEPLSI KAQAGFDPVV QLLADNGFST YSTTIETRAD LVKTKPETVR KFVEASIIGW
NNYLYGDNKA ANEMIAKINP DSPVAASQGS IELMKKMGIV DSGESLAKGI GAMDEARVKD
FYDKMVKAGL YKPGEVDLSK VVTTQFVNKG VGLDIRKKLA GK
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