| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5133 |
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| Symbol | |
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| ID | 7971504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5447470 |
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| End bp | 5448270 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795727 |
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| Product | ABC transporter related |
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| Protein accession | YP_002947001 |
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| Protein GI | 239818091 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCT CCGCGCCTCC TTCCCCGCCG CTGGTCAGCC TGCGCCGCGT CAGCAAGCGC
TTTGCCAACG GCACGCTCGC GCTGCAGGGC ATGACGCTGG ACATCGGCGA GCACGACTTC
ATCAGCTTTC TCGGCCCCTC GGGCTGCGGC AAGAGCACCG CGCTCAGGCT GATCGCCGGC
CTGACCCGGC TCAGCTCGGG CGAGATGCAA TGGTCCGGCG CCAACACCGG CAAGACACAG
AGCGACCGCG ACCTGGGCTT CGTGTTCCAG GAGCCCACGC TCATGCCCTG GGCCAAGGTG
TTCGACAACG TCTGGCTGCC GCTCAAGCTC GCGGGCCAGA GCCGCGATGC GGCCGCGCCG
GTGGTGCAGC AGGCGCTCGA GATGGTCGGC CTCTCGCGCT TCGCGGGCGT GTACCCGCGC
GAGCTTTCGG GCGGCATGAA GATGCGCGTG TCGATCGCGC GCGCGCTGGT CACGCATCCG
CGCCTCTTGC TGATGGACGA GCCCTTTGCC GCGCTCGACG AGATGACGCG CATCAAGCTC
AACAACGACC TGCTCGCGAT CTGGCGCGAG CACCGCTTCT CGGTGGTGTT CGTCACGCAC
AGCGTCTACG AGTCGGTGTA CCTCTCGAAC CGCATCGTGG TGATGGCGGC GCGCCCGGGC
CGCGTGATCG ACGAGATCCG CATCGACGAG CCCTATCCGC GCGGCGAGGA ATTCCGCACC
TCGAGCCGCT ACAACGCGCA CTGCACCGCC GTGTCGCAAT CCCTGCATGG AGCCCTGCAT
GGCGTCGACA TCGATCACTG A
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| Protein sequence | MESSAPPSPP LVSLRRVSKR FANGTLALQG MTLDIGEHDF ISFLGPSGCG KSTALRLIAG
LTRLSSGEMQ WSGANTGKTQ SDRDLGFVFQ EPTLMPWAKV FDNVWLPLKL AGQSRDAAAP
VVQQALEMVG LSRFAGVYPR ELSGGMKMRV SIARALVTHP RLLLMDEPFA ALDEMTRIKL
NNDLLAIWRE HRFSVVFVTH SVYESVYLSN RIVVMAARPG RVIDEIRIDE PYPRGEEFRT
SSRYNAHCTA VSQSLHGALH GVDIDH
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