| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5130 |
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| Symbol | |
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| ID | 7971501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5444722 |
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| End bp | 5445876 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795724 |
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| Product | cytochrome c oxidase subunit II |
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| Protein accession | YP_002946998 |
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| Protein GI | 239818088 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATGG CCGTCGCCCT GCTGCTCATC GTGCTCGGCT CGGTGCTGTT CCACGTCTTC
AATCCGTGGT GGACGACGCC CCTTGCGTCG AACTGGCAGC CGATGGACGA CACCCTGTCC
ATCACGCTGC TGATCACGGG GATCTTCTTC ATTGCCATCA ACGTGTTCGT CGCCTACATG
CTGGTGCGCT TTCGCCACCG CGAGGGACGC CGCGCGGCGC ATGAGCCCGA GAACAGGAAG
CTCGAGCGCT GGCTGATCGG CGGCACCACC GCCGGCATCA TGGCGCTGCT GGCGCCCGGC
CTCGTGGTGT ACGCGAACTA CGTCAGGGAG CCCCGCGACG CCCTCGTGCT CGAGGTGCTG
GGCCAGCAAT GGCAATGGCG CTTCCGCTTC CCGGGCGAGG ACGGCAAGCT GGGCGCGACC
GATGCGCGCT TTGTCAGCGC CACCAATCCG TTCGGCATCG ACCCCGCCGA CCGCGCCGGG
CAGGACGACC TCCTGACCGC CGGCAACGAG GTGCACCTGC CGCTCGGCAA GCCGGTGCTG
GTGCTGATGC GTTCGAACGA CGTGCTGCAC GACTTCTTCG TGCCGAACTT CCGCGCCCGG
ATGAACATGG TGCCGGGACA GGTCAGCCGC TTCTGGTTCA CGCCGGCCGT CGCGGGCCGC
TACGAAGCGC TGTGCGCGCA GCTGTGCGGC GTGGGCCATC CCAACATGCG CGGCTACGTG
GTGGTGGAAG ACCCGGCGGC CTACCAGGCC TGGCACGCGG CGCTGCCGAC CTTCGCCAGG
TCGCAGGCCA AGGCGCCCGA GCCCCCGGCC GGCGCCGCCG GCGGCGATGC ACGCGTCCAG
CAGGGGCGCG CGCTGGCGGA CAGCAAGGGC TGCGTGGCCT GCCACACGGT CGACGGCAGC
GCGCGCGTGG GGCCGACCTG GAAGGGCCTG CACGGCAAGA CCGAAACCAT GGCGGACGGC
AGCACCGCGC TGGTCGACGA AGCCTATCTG CGCAGCTTCA TCCGCGATCC GCAGGCCCGC
CAGGTGAAGG GCTTCCCGCC GGTCATGCCG AAGATCGAGT TGAGCGATGA AGAACTGGCC
GCGCTGGTGG CCTATATCCA GAGTCTGGGC AGCCCGCCGG CGCAGGCTGC CGCCGAACAG
AAGGCTGCGC GATGA
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| Protein sequence | MTMAVALLLI VLGSVLFHVF NPWWTTPLAS NWQPMDDTLS ITLLITGIFF IAINVFVAYM
LVRFRHREGR RAAHEPENRK LERWLIGGTT AGIMALLAPG LVVYANYVRE PRDALVLEVL
GQQWQWRFRF PGEDGKLGAT DARFVSATNP FGIDPADRAG QDDLLTAGNE VHLPLGKPVL
VLMRSNDVLH DFFVPNFRAR MNMVPGQVSR FWFTPAVAGR YEALCAQLCG VGHPNMRGYV
VVEDPAAYQA WHAALPTFAR SQAKAPEPPA GAAGGDARVQ QGRALADSKG CVACHTVDGS
ARVGPTWKGL HGKTETMADG STALVDEAYL RSFIRDPQAR QVKGFPPVMP KIELSDEELA
ALVAYIQSLG SPPAQAAAEQ KAAR
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