| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5122 |
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| Symbol | |
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| ID | 7971493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5437515 |
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| End bp | 5437991 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795716 |
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| Product | transcriptional regulator, AsnC family |
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| Protein accession | YP_002946990 |
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| Protein GI | 239818080 |
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| COG category | [K] Transcription |
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| COG ID | [COG1522] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.499071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCA TTGACAAGTT CGACCTCGCA ATCCTGCAAG AACTGCAGGC CGACGGCCGC
CTCACCAACG CCGAGCTTGC GCAGCGCGTG GGGCTCTCGG CCGCGCCCTG CTGGCGCCGT
GCGCGCGCGC TGGAGGAGGC CGGCTTCATC AAGGGCTACC ACGCCGAGAT CGACCGCCAC
AAGATCGGGC TGGGCGTGCT CGCTTTCGTG CGCGTGGACA CCGAGCGCGT CACCAACGAT
GCAACGCTGA AACTGGAGGA CGCGATCCGC AAGCTGCCCG AGGTGGTGGC CTGCCACTAC
ATCAGCGGCA CCGGCACCTT CGAGCTGCAG GTGGTGGCAC AGGACCTGGA CGGCTTCTCG
GCCTTCGCGC GCCAGCACCT CATGAACCTG CCAAACGTGA AGGACCTGCA CACCAGCTTC
TCGCTGGGCG AGGTGAAGGC CAGCAGCGCC TGGCCGCTCG GGCACCTGGC GCCCTAG
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| Protein sequence | MESIDKFDLA ILQELQADGR LTNAELAQRV GLSAAPCWRR ARALEEAGFI KGYHAEIDRH
KIGLGVLAFV RVDTERVTND ATLKLEDAIR KLPEVVACHY ISGTGTFELQ VVAQDLDGFS
AFARQHLMNL PNVKDLHTSF SLGEVKASSA WPLGHLAP
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