| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5111 |
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| Symbol | |
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| ID | 7971482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5422425 |
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| End bp | 5423381 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795705 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_002946979 |
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| Protein GI | 239818069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.030161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACTCCGC TGAAAGTCGT TTTCGCGGGC ACGCCCGAGT TCGCGCGCGC CGCGCTCGAA
GCCATTGCCG CCGCCGGCCA TGAGATCGCG CTGGTGCTGA GCCAGCCCGA CCGGCCCGCG
GGCCGCGGCA TGAAGCTGCA GGCCTCGCCC GTCAAGCAAT GCGCCGTTGC CCACGGCTGG
CCGGTGGCGC AGCCGCGCAG CCTGCGGCTG GACGGCAAGT ACCCGCAAGA CGCCGCGGCC
GCGCGCGAGG CCCTGCTGGC GGCCCGGCCC GACGTGATGG TGGTGGCGGC CTACGGCCTC
ATCCTGCCGC AATGGGTGCT CGACCTGCCG GTTCACGGAT GCCTCAACAT CCACGCCAGC
CTGCTGCCGC GATGGCGCGG CGCGGCGCCG ATCCACCGCG CCATCGAGGC CGGCGACGCG
CAGACCGGCA TCACCATCAT GCAGATGGAC GCCGGCCTGG ACACCGGCGA CATGCTGCTG
CGCGAAGCCG TCGACATCGG CAGCGACACC ACCGCGCGGC TGCACGACCG CCTGGCCGAG
CTGGGCGGCC GCCTGATCGT CCAGGCGCTG GCCGACATCG GCCGCCTCGC GCGCACGCCG
CAGCCGGCCG AAGGCGTCAC CTACGCCAGC AAGGTCGAGA AGCACGAAGC CCAGATCGAC
TGGAACCAGC CCGCCGACGC GATCGTGCGG CGCATCCGGG CCTTCGACCC GTTCCCGGGC
GCCAACAGCC TGCTCGATGG CGAGACCATC AAGCTCTGGG CCGCGCATGC GGCGCCGCCG
GCCGAGGTTT CGGCCGCGCC GGGCACCCTG CTGGCCGTGA GCGACGCCGG CGTGGCGGTG
GCGGCGGCCG GCTCGGTGGT GATGGCCACC GAACTGCAGC GGCCCGGCGG CAAGCGCCTG
GCCGTGGCCG ACTTCCTGCG CGGCTTCGAC CTGAAGCCCG GGCAGCGGTT CGGCTGA
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| Protein sequence | MTPLKVVFAG TPEFARAALE AIAAAGHEIA LVLSQPDRPA GRGMKLQASP VKQCAVAHGW
PVAQPRSLRL DGKYPQDAAA AREALLAARP DVMVVAAYGL ILPQWVLDLP VHGCLNIHAS
LLPRWRGAAP IHRAIEAGDA QTGITIMQMD AGLDTGDMLL REAVDIGSDT TARLHDRLAE
LGGRLIVQAL ADIGRLARTP QPAEGVTYAS KVEKHEAQID WNQPADAIVR RIRAFDPFPG
ANSLLDGETI KLWAAHAAPP AEVSAAPGTL LAVSDAGVAV AAAGSVVMAT ELQRPGGKRL
AVADFLRGFD LKPGQRFG
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