| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5108 |
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| Symbol | |
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| ID | 7971479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5420365 |
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| End bp | 5421339 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644795702 |
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| Product | hypothetical protein |
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| Protein accession | YP_002946976 |
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| Protein GI | 239818066 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.031393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAC TGATTCCCCT CATGGCCGCG GCCCTCGCGC TGGCCAGCCC CTTCGCATCG
GCGCAGCAGC CTGCCGCCTA CCCGAGCCAG CCCGTCAGAT GGATCGTGCC CTACGTGGCC
GGCGGCGGCA CCGACAACCT CGCGCGCTCG CTGGCCGAGG CGATGCAGCC GTCGCTCGGG
CAGCCGCTCA TCATCGACAA CCGGCCCGGC GCATCGACCA ACATCGGCGT CTCGGTGCTG
ATGCAGGCCA GGCCCGACGG CTACACCATC ATGCAGGCCG AGAACGCGGC GCTGCTCTTC
AACGAGCACA TGTTCGCCAA GCTGCCCTAC AAGCCCGCGA GCGACTTCAC CTACATCGGC
GCCATCGGCC GCTTCCCGGT GGCGCTGGTG GTGCACCCGG ACTTCCCCGC GAAGAACGTG
GCCGAGTTCG TGCGCTACGT GAAGGCCAAC CCCGAGAAGG TGAGCTATGC CTCGCCGGGC
AACGGCTCGC CGCACCATAT GGCAATGGAG CTCTTCAAGC AGAAGGCCGG GCTCAGCATC
ACGCATGTGC CCTACAAGGG CGCCGCGCCC GCCATGACCG ACGTGATGGG CGGCCAGGTG
CCCACCATGA TGCTCGACCT GGCCTCGGGC CTGCCGATCA TCAAGGCGGG CAAGGTGCGG
GTGCTGGCGA TTGCGCTGCC GCAGCGCGCG AGCGCACTGC CCGAGGTGCC CACCTTCGTC
GAGGCTGGCT TCAGCGACGT CAACGCCTAC GCCTTCCACG GCCTGATCGG CCCGGCCGGC
ATGCCGCCCG AGGCGGTGGC GCGCATCAAC AACGAACTGC ACAAGGCGAT GAAGGCACCG
AAGGTGGTGG AGTTGTTCTC GAAGTTCGGC TTCGAGGCGC TGCCGGGCAC GCCGCAGGAT
TTCTACAAGC TCTCGCGGGC CGAGAGCGAA CGCTGGGGCA GGATCATCGC GGCCGCCGGC
GTGAAGCTGG ACTGA
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| Protein sequence | MKRLIPLMAA ALALASPFAS AQQPAAYPSQ PVRWIVPYVA GGGTDNLARS LAEAMQPSLG
QPLIIDNRPG ASTNIGVSVL MQARPDGYTI MQAENAALLF NEHMFAKLPY KPASDFTYIG
AIGRFPVALV VHPDFPAKNV AEFVRYVKAN PEKVSYASPG NGSPHHMAME LFKQKAGLSI
THVPYKGAAP AMTDVMGGQV PTMMLDLASG LPIIKAGKVR VLAIALPQRA SALPEVPTFV
EAGFSDVNAY AFHGLIGPAG MPPEAVARIN NELHKAMKAP KVVELFSKFG FEALPGTPQD
FYKLSRAESE RWGRIIAAAG VKLD
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