| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5102 |
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| Symbol | |
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| ID | 7971473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5414836 |
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| End bp | 5415744 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795696 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | YP_002946970 |
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| Protein GI | 239818060 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.65094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTGA CCCTGCGCCA ATTGCGCGCC TTCGCTGCCG TGGCCGAGAC CGGCAGCTTC
ACCGCGGCCG CGCAGCAGCT GCACCTCACG CAGTCGGCGC TCAGCGTGCT GGTGCGCGAG
CTCGAGCGCG AGATGGGCGT GCAGCTGCTC GACCGCCACA CGCGGCGCGT GCAGTTGTCC
GAGGCCGGGC GCGAGTTCCT GCCCTCGGTG CACCGGCTGC TGGGCGACCT CGCGGGCGCG
GTAGCCGGCG TCACGGATTT GCGTGACAAG AAGAAAGGGC TGTTGCGGCT TGCAGCGCCG
CAGCTCATGG CCTGCACGCT GATGCCGCGC GTGATCGCGC TCTACCGCGA GGCGTTCCCC
GACGTCGATG TGCGCCTGGC CGACACGCTG CCCGAGCACC TGCTGGCGGG CGTGACGGCC
GGTGACGTGG AGCTTGCGGT GGGGCAGGAC GTGGCGGTCG ACGGCGCCGT CGAGCGCCGC
ACGCTGTTCC GCGACCGCCA CTGGCTGATC TGCCCGCCCG GCCACGCCTT TGCGAAGCGC
CGCAAGGTGC GCTGGCATGA ACTCGGCCCC TACACCTTCA TCGCGCCCAC GCGCGACTTC
CGCCAGCGCG TGCTGCCCGA GCTCGCGCCG GCCGAGCGCG AGCTCATGCT GCGCCCGGGC
ACCCAGGAGG TGTCGTACAT GACCACCGCG CTCGGCATGG TGGCCTCGGG GCTCGGGCTC
ACGGTGTGCC CGACCTATTC GGCGCCGCTG GTGCGCGCCC ACGGCCTGCA GATGGTGCGG
CTCGAATCGC CCGACTTCCA CCGCGAGGTC TGCATCTACA GCGCGGCGCG GCGCACCCTG
TCGCCGGCTG CCGCGAGCTT TGTCGAGATC CTCGAGCGCC ATGCCCGGAC GCAGCCCAAG
GCCGGATGA
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| Protein sequence | MNLTLRQLRA FAAVAETGSF TAAAQQLHLT QSALSVLVRE LEREMGVQLL DRHTRRVQLS
EAGREFLPSV HRLLGDLAGA VAGVTDLRDK KKGLLRLAAP QLMACTLMPR VIALYREAFP
DVDVRLADTL PEHLLAGVTA GDVELAVGQD VAVDGAVERR TLFRDRHWLI CPPGHAFAKR
RKVRWHELGP YTFIAPTRDF RQRVLPELAP AERELMLRPG TQEVSYMTTA LGMVASGLGL
TVCPTYSAPL VRAHGLQMVR LESPDFHREV CIYSAARRTL SPAAASFVEI LERHARTQPK
AG
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