Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5097 |
Symbol | |
ID | 7971468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5409146 |
End bp | 5410210 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644795691 |
Product | fructose-1,6-bisphosphate aldolase |
Protein accession | YP_002946965 |
Protein GI | 239818055 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0191] Fructose/tagatose bisphosphate aldolase |
TIGRFAM ID | [TIGR00167] ketose-bisphosphate aldolases [TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACTCG TCTCGATGCG CGAACTGCTG GACCACGCAG CCGCCAACGG CTACGGCATT CCGGCCTTCA ACGTCAACAA CCTCGAACAG GTCCAGGCCG TGATGGAGGC CGCCAAGGAA ACCGGCGCGC CCGTCATCCT GCAGGCCAGC GCCGGTGCCC GCAAATACGC CGGCGAAGCC TTCATCAAGC ACCTGATCCA GGCCGCGATC GAGCAATACC CGAACATCCC GCTGGTCATG CACCAGGACC ACGGCCAGAA CCCGGATGTC TGCAAGGGCG CCATCGACCT GGGCTTCAGT TCGGTGATGA TGGACGGCTC GCTCGAGGCC GACGGCAAGA CCATTGCCAG CTACGACTAC AACGTGGACG TCACCAAGAA GGTGTCGGAC ATGGCCCACC GCCTGGGCGT GACCGTCGAA GGCGAGCTCG GCTGCCTGGG CTCGCTCGAG ACCATGAAGG GCGACAAGGA AGACGGCCAC GGCACCGACG ACACCATGAC GCGCGAGCAG CTGCTGACCG ATCCCGAGCA GGCCGCCGAC TTCGTCAAGC GCACCCAGAT CGACGCGCTG GCCATCGCCA TCGGCACCAG CCACGGCGCC TACAAGTTCA CGCGCGAGCC CACCGGCGAC ATCCTGGCGA TCGACCGCAT CAAGGAAATC CACCGCCGCA TTCCCAACAC CCACCTGGTG ATGCACGGCT CGTCGAGCGT GCCGCAGGAG CTGCTGGCCA TCATTCGCCA GTACGGCGGC AACATGAAGG AAACCTACGG CGTGCCCGTG AAGGAAATCC AGGAAGCCAT CAAGCACGGC GTGCGCAAGA TCAACATCGA CACCGACATC CGCCTGGCCA TGACCGGCGC GGTGCGCAAG TTCCTGGCCG AGAACCCCGA GAAGTTCGAC GCCCGCGAAT GGCTCAAGCC CGCGCGCGAA GCCGCCAGGC TGATTTGCAA GCAGCGCTAC ATCGAGTTCG GCTGCGAAGG CCAGGGCGCC AAGATCAAGG GCGAGACGCT GCAGGTGGTC GCCGCCAAGT ACGCCAAGGG CGAGCTCGCG CAAGAAGTGG TCTGA
|
Protein sequence | MALVSMRELL DHAAANGYGI PAFNVNNLEQ VQAVMEAAKE TGAPVILQAS AGARKYAGEA FIKHLIQAAI EQYPNIPLVM HQDHGQNPDV CKGAIDLGFS SVMMDGSLEA DGKTIASYDY NVDVTKKVSD MAHRLGVTVE GELGCLGSLE TMKGDKEDGH GTDDTMTREQ LLTDPEQAAD FVKRTQIDAL AIAIGTSHGA YKFTREPTGD ILAIDRIKEI HRRIPNTHLV MHGSSSVPQE LLAIIRQYGG NMKETYGVPV KEIQEAIKHG VRKINIDTDI RLAMTGAVRK FLAENPEKFD AREWLKPARE AARLICKQRY IEFGCEGQGA KIKGETLQVV AAKYAKGELA QEVV
|
| |