Gene Vapar_5097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_5097 
Symbol 
ID7971468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp5409146 
End bp5410210 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID644795691 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_002946965 
Protein GI239818055 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTCG TCTCGATGCG CGAACTGCTG GACCACGCAG CCGCCAACGG CTACGGCATT 
CCGGCCTTCA ACGTCAACAA CCTCGAACAG GTCCAGGCCG TGATGGAGGC CGCCAAGGAA
ACCGGCGCGC CCGTCATCCT GCAGGCCAGC GCCGGTGCCC GCAAATACGC CGGCGAAGCC
TTCATCAAGC ACCTGATCCA GGCCGCGATC GAGCAATACC CGAACATCCC GCTGGTCATG
CACCAGGACC ACGGCCAGAA CCCGGATGTC TGCAAGGGCG CCATCGACCT GGGCTTCAGT
TCGGTGATGA TGGACGGCTC GCTCGAGGCC GACGGCAAGA CCATTGCCAG CTACGACTAC
AACGTGGACG TCACCAAGAA GGTGTCGGAC ATGGCCCACC GCCTGGGCGT GACCGTCGAA
GGCGAGCTCG GCTGCCTGGG CTCGCTCGAG ACCATGAAGG GCGACAAGGA AGACGGCCAC
GGCACCGACG ACACCATGAC GCGCGAGCAG CTGCTGACCG ATCCCGAGCA GGCCGCCGAC
TTCGTCAAGC GCACCCAGAT CGACGCGCTG GCCATCGCCA TCGGCACCAG CCACGGCGCC
TACAAGTTCA CGCGCGAGCC CACCGGCGAC ATCCTGGCGA TCGACCGCAT CAAGGAAATC
CACCGCCGCA TTCCCAACAC CCACCTGGTG ATGCACGGCT CGTCGAGCGT GCCGCAGGAG
CTGCTGGCCA TCATTCGCCA GTACGGCGGC AACATGAAGG AAACCTACGG CGTGCCCGTG
AAGGAAATCC AGGAAGCCAT CAAGCACGGC GTGCGCAAGA TCAACATCGA CACCGACATC
CGCCTGGCCA TGACCGGCGC GGTGCGCAAG TTCCTGGCCG AGAACCCCGA GAAGTTCGAC
GCCCGCGAAT GGCTCAAGCC CGCGCGCGAA GCCGCCAGGC TGATTTGCAA GCAGCGCTAC
ATCGAGTTCG GCTGCGAAGG CCAGGGCGCC AAGATCAAGG GCGAGACGCT GCAGGTGGTC
GCCGCCAAGT ACGCCAAGGG CGAGCTCGCG CAAGAAGTGG TCTGA
 
Protein sequence
MALVSMRELL DHAAANGYGI PAFNVNNLEQ VQAVMEAAKE TGAPVILQAS AGARKYAGEA 
FIKHLIQAAI EQYPNIPLVM HQDHGQNPDV CKGAIDLGFS SVMMDGSLEA DGKTIASYDY
NVDVTKKVSD MAHRLGVTVE GELGCLGSLE TMKGDKEDGH GTDDTMTREQ LLTDPEQAAD
FVKRTQIDAL AIAIGTSHGA YKFTREPTGD ILAIDRIKEI HRRIPNTHLV MHGSSSVPQE
LLAIIRQYGG NMKETYGVPV KEIQEAIKHG VRKINIDTDI RLAMTGAVRK FLAENPEKFD
AREWLKPARE AARLICKQRY IEFGCEGQGA KIKGETLQVV AAKYAKGELA QEVV