Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_5096 |
Symbol | |
ID | 7971467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 5408134 |
End bp | 5409039 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644795690 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_002946964 |
Protein GI | 239818054 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG TCCACACCTC TTCCATCCAG AGCCTGCCCC TGCTTGCGCG CGGCAAGGTG CGAGACAACT ACGCCGTCGG CGAAGACCGC ATCCTGATGG TCGCGAGCGA CCGGCTCAGC GCCTTCGACG TGATCATGGG CGAGCCGATC CCGGGCAAGG GCGAGATCCT CACGCAGATG GCGCTGTGGT GGTTCGACCG CCTCGGCCAG CTGTGCCCCA ACCACCTGAC GGGCGAAGCG CCCGAGAGCG TGGTCACGCC CGAAGAAGTG CCGCAGGTCA CCGGCCGCTC GATGCTGGTC AAGCGCCTGA CGCCGATCCC GGTCGAGGCC GTGGTGCGCG GCTACCTGGC CGGCAGCGGC TGGAAGGAAT ACCAGGAAAG CCGTTCGGTC TGCGGCGTGC CGCTGCCCGA AGGGCTCACC AACGCGAGCA AGCTGCCGCG CCCGATCTTC ACGCCCGCCG CCAAGGCCGC GGCCGGCGAG CACGACGAGA ACATCAGCTA CGACCGCGTG GTCGAGATCG TCGGCCCCAA GCTGGCGCAG CAGATCCGCG AGACCAGCCT GGAGATCTAC GAAACCGCCG CGCAGATCGC GCTGGGCAAG GGAATGATCA TTGCCGACAC CAAGTTCGAG TTCGGCCTGG ACGAAGCCGG CACGCTGGTG CTGATGGACG AAGTGCTCAC GCCCGACAGC TCGCGCTACT GGCCGGTCGA GGGCTACCAG GCCGCGCTGG CCGCGGGCGC CAATCCGCCG AGCTACGACA AGCAGTTCGT GCGCGACTGG CTCGAAGCCA CCAAGATCAA CGGCAAGCCC TGGGACAAGA CCCCGCCGGC GCCGCGCCTG CCGGCCGAGG TCATCGAAAA GACCGCGGCC AAGTACCGCG AAGCGCTGGA GCGCCTCACG GGCTGA
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Protein sequence | MTTVHTSSIQ SLPLLARGKV RDNYAVGEDR ILMVASDRLS AFDVIMGEPI PGKGEILTQM ALWWFDRLGQ LCPNHLTGEA PESVVTPEEV PQVTGRSMLV KRLTPIPVEA VVRGYLAGSG WKEYQESRSV CGVPLPEGLT NASKLPRPIF TPAAKAAAGE HDENISYDRV VEIVGPKLAQ QIRETSLEIY ETAAQIALGK GMIIADTKFE FGLDEAGTLV LMDEVLTPDS SRYWPVEGYQ AALAAGANPP SYDKQFVRDW LEATKINGKP WDKTPPAPRL PAEVIEKTAA KYREALERLT G
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