| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5093 |
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| Symbol | |
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| ID | 7971464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5406035 |
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| End bp | 5406583 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795687 |
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| Product | phosphoribosylaminoimidazole carboxylase, catalytic subunit |
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| Protein accession | YP_002946961 |
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| Protein GI | 239818051 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAA CCATTCAGGT CGGTGTAGTG ATGGGCTCGA ACTCCGATTG GGAGACGATG
CGCAACGCGG TCGAGATTCT CCAGCAATTC GGGATCCAGC ACGAAGCGAA GGTGGTCTCG
GCCCACCGGA TGCCCGATGC GCTCTTCGCC TATGCCGAAA GCGCGGCCGG GCGCGGGCTG
GCCGCGATCA TCGCGGGTGC GGGCGGCGCC GCCCACCTGC CGGGCATGCT GGCCGCCAAG
ACCACGGTGC CGGTGCTCGG CGTGCCGGTG GCCAGCCGCC ACCTGCAGGG CGTCGACTCG
CTCTACAGCA TCGTGCAGAT GCCCAAGGGC GTGCCGGTGG CCACCTTTGC CATCGGCAAC
GCGGGGGCGG CCAATGCGGC GCTGTTCGCG GTGGCGATGC TGGCGGTGAA CGACCCGGCG
CTGCGCACCC GGCTCGACAC CTTCCGTGCC GCGCAAACCG CCGCGGCGGA AGCCATGACG
CTGCCGCCGC CGGCCGCCGA TGCCGCCGCC GTGTCGCCGT TCTCGCCCCA GGGCGGGGGT
GCGCTGTGA
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| Protein sequence | MNETIQVGVV MGSNSDWETM RNAVEILQQF GIQHEAKVVS AHRMPDALFA YAESAAGRGL
AAIIAGAGGA AHLPGMLAAK TTVPVLGVPV ASRHLQGVDS LYSIVQMPKG VPVATFAIGN
AGAANAALFA VAMLAVNDPA LRTRLDTFRA AQTAAAEAMT LPPPAADAAA VSPFSPQGGG
AL
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