| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5092 |
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| Symbol | |
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| ID | 7971463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5404842 |
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| End bp | 5406038 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644795686 |
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| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
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| Protein accession | YP_002946960 |
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| Protein GI | 239818050 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
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| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCACA ACGGCAACGG CCTTCCCATT CTTCCGGGCG CCACGCTCGG CGTGCTCGGC
GGCGGCCAGC TGGGCCGCAT GTTCGCCCAC GCCGCCCAGC GCATGGGCTA TTTCACGGCC
GTGCTCGACC CTGACGCCGA CAGCCCCGCC GGCCGCGTGA GCCACCACCA CATCCACACC
GACTACGCCG ACGTCGACGG CCTCGCGCGG CTCGCGGGCC TGGCCGATGC GGTCACCACG
GAGTTCGAGA ACGTGCCGGC GCCCTCGCTG GAGAAGCTGT CGGTGGCCCG GCCCGTGGCC
CCCGACGCGG GCGCCATCGC CATCGCGCAG GACCGCATCG CCGAAAAGGC CCATTTCACG
CGCTGCGGCG TGGCCTGCGC GCCCTATGCG GTCATCGAGA CCGCGGCCCA GCTCGCCGCG
GTGGAGGATG CGCTGCTGCC GGGCATCCTC AAGACCGCGC GCCTGGGCTA CGACGGCAAG
GGCCAGCAGC GCGTGTCCAC GCGCGCCGAA CTGGTCGACG CCTGGCAGGC CGCGGGCTGC
GTGCCCTGCG TGCTCGAAAA GCTGCTGCCG CTCGAATTCG AATGCTCGGT GATCGTCGCG
CGTGGCCGCG ACGGGCAGCT GGTGCACTTT CCGCCCCAGC GCAACCTGCA CCGGGACGGC
ATCCTGGCCG TGACCGAAGT GCACGCGCAG AACATGCCCA AGACCGTGGC CCAGGCGGCC
ATCAACTCGG CCAGGAGCAT TGCGACCGGG CTGGACTACG TGGGCGTGCT GTGCGTGGAG
TTCTTCGCGC TGGCCGACGG CTCGCTGGTG GTGAACGAAA TGGCGCCCCG GCCGCACAAC
AGCGGCCACT ACACCATGGA AGCCTGCGAC GTATCGCAGT TCGAGCTGCA GGTGCGCACC
CTCGCGGGCC TGCCGCTGGC CGCGCCGCGC CAGCACAGCC CGGCGATCAT GCTGAACCTG
CTGGGCGACC TGTGGTTCAC CGCGGGCGGC GACAAGCCGG TGGCGCCGCG CTGGAGCGAC
GTGCTCGCGC TGCCCGGCGT GCACCTGCAC TTGTACGGCA AGATCGAACC GCGCCGCGGC
CGCAAGATGG GCCACCTGAC GCTCACCGGC GCCACCCTCG AAAATGTGCG CGCCGCGGCC
TCCCAGGCCG CCACCGTGCT CGGCCTGCCG GCGCTGTCGG CGGCCGACTT CGCATGA
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| Protein sequence | MNHNGNGLPI LPGATLGVLG GGQLGRMFAH AAQRMGYFTA VLDPDADSPA GRVSHHHIHT
DYADVDGLAR LAGLADAVTT EFENVPAPSL EKLSVARPVA PDAGAIAIAQ DRIAEKAHFT
RCGVACAPYA VIETAAQLAA VEDALLPGIL KTARLGYDGK GQQRVSTRAE LVDAWQAAGC
VPCVLEKLLP LEFECSVIVA RGRDGQLVHF PPQRNLHRDG ILAVTEVHAQ NMPKTVAQAA
INSARSIATG LDYVGVLCVE FFALADGSLV VNEMAPRPHN SGHYTMEACD VSQFELQVRT
LAGLPLAAPR QHSPAIMLNL LGDLWFTAGG DKPVAPRWSD VLALPGVHLH LYGKIEPRRG
RKMGHLTLTG ATLENVRAAA SQAATVLGLP ALSAADFA
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