| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_5091 |
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| Symbol | |
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| ID | 7971462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 5403844 |
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| End bp | 5404845 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644795685 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_002946959 |
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| Protein GI | 239818049 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTCG ACGGCCAATC CCCCGATGCC ATTGCCGAGG CCGTGCGCGT GCTGCGCGCG
GGCGGGCTGG TCGCTTTCCC GACCGAAACC GTCTACGGCC TGGGCGCCGA TGCCACCAGC
GACATGGCGG TGGCCGGCAT CTTCAAGGCC AAGGGCCGGC CGGCCGACCA TCCGCTGATC
GTCCACGTGG CGGCCGGCAT CAAGGGCACC GAGGCGCTGT CGCGCTTTGC GCAGCCGCTG
CCGCCGTTCG CCCAGAAGCT GGTGCAGGCC TTCTGGCCCG GCCCGCTGAC GCTGATCGTC
ACGCGCCAGC CCGGCGTGGC GGCCGCGGCC GCCGGCGGGC AGGACACCAT CGGCCTGCGC
TGCCCCTCGC ATCCGGTCGC GCAGGCCCTG CTCGAGGCCT GCGCCGAGCA GGGCGTGCCG
GGCCTCGCGG GTCCGAGCGC CAACCGCTTC GGCCGCGTGA GCCCCACCAC CGCGCAGCAT
GTGCATGACG AGTTCGGCGA TGCGCTGACG GTGATCGACG GCGGCGCCTG CGAGGTCGGC
ATCGAGTCGA CCATCGTCGA CTGCAGCCGC GGCGCGCCCG TGCTGCTGCG CCCGGGCCTG
ATCACGCGCG CGCAGATCGA GGCCGCCGCG GGCGAGCGCC TGAGCAACCG CGAGGTGCTC
GAGACGCCCG ATCCGCGCGC CTCCGGCACG CTGGAAGCGC ACTACGCGCC GAACGCCAAG
CTGCGGCTGA TGGATGCCAA GGCCATCCAG GCCGGCCTCG ATGTGCTCGG CCCGGGCGCA
GCCCACATCG CGGTATGGAC GCGCGCCGAG GTGCGCAGCC ACTCGCAGCG CGTGTTGCAG
CGGCGCATGC CGGACGACGC GGCGGCCAGC GCGCACCAGC TGTTCGCGGT GCTGCGCGAG
TTCGATGCCG AGGGCGTCAA GCTGATCTGG GTCGAGACGC CGCCCGACAC GCCCGAATGG
GAAGGCGTGC GCGACCGCCT GCATCGCGCG TCCATGGGCT GA
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| Protein sequence | MILDGQSPDA IAEAVRVLRA GGLVAFPTET VYGLGADATS DMAVAGIFKA KGRPADHPLI
VHVAAGIKGT EALSRFAQPL PPFAQKLVQA FWPGPLTLIV TRQPGVAAAA AGGQDTIGLR
CPSHPVAQAL LEACAEQGVP GLAGPSANRF GRVSPTTAQH VHDEFGDALT VIDGGACEVG
IESTIVDCSR GAPVLLRPGL ITRAQIEAAA GERLSNREVL ETPDPRASGT LEAHYAPNAK
LRLMDAKAIQ AGLDVLGPGA AHIAVWTRAE VRSHSQRVLQ RRMPDDAAAS AHQLFAVLRE
FDAEGVKLIW VETPPDTPEW EGVRDRLHRA SMG
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